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PLAA phospholipase A2 activating protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707876, updated on 5-Mar-2024

Summary

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Gene symbol
PLAA
Gene description
phospholipase A2 activating protein
See related
Ensembl:ENSMMUG00000064752
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PLAA in Genome Data Viewer
Location:
chromosome: 15
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (56814446..56854808)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (56937445..56978612)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 74 Neighboring gene leucine rich repeat containing 19 Neighboring gene melanoma-associated antigen 3-like Neighboring gene caspase activity and apoptosis inhibitor 1 Neighboring gene uncharacterized LOC114672777

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase A-2-activating protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260548.1 → NP_001247477.1  phospholipase A-2-activating protein

    See identical proteins and their annotated locations for NP_001247477.1

    Status: PROVISIONAL

    Source sequence(s)
    JV043977
    UniProtKB/TrEMBL
    F6VW58, H9G1Z7, H9ZFH1
    Related
    ENSMMUP00000077407.1, ENSMMUT00000101420.1
    Conserved Domains (4) summary
    cd00200
    Location:10 → 297
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:69 → 110
    7WD40; WD40 repeat [structural motif]
    pfam08324
    Location:536 → 789
    PUL; PUL domain
    pfam09070
    Location:346 → 458
    PFU; PFU (PLAA family ubiquitin binding)

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    56814446..56854808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028834308.1 → XP_028690141.1  phospholipase A-2-activating protein isoform X1

    Conserved Domains (4) summary
    cd00200
    Location:2 → 154
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:11 → 45
    7WD40; WD40 repeat [structural motif]
    pfam08324
    Location:393 → 646
    PUL; PUL domain
    pfam09070
    Location:203 → 315
    PFU; PFU (PLAA family ubiquitin binding)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials