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SYNJ1 synaptojanin 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707829, updated on 17-Aug-2024

Summary

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Official Symbol
SYNJ1provided by VGNC
Official Full Name
synaptojanin 1provided by VGNC
Primary source
VGNC:VGNC:78071
See related
Ensembl:ENSMMUG00000004624
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SYNJ1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
37
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (13796781..13899208)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (13941142..14044368)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene PAX3 and PAX7 binding protein 1 Neighboring gene uncharacterized LOC106997272 Neighboring gene microRNA mir-7185 Neighboring gene cilia and flagella associated protein 298 Neighboring gene t-complex 10 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptojanin-1
XP_014988489.2
XP_014988490.2
XP_014988492.2
XP_014988493.2
XP_014988494.2
XP_014988498.2
XP_014988506.2
XP_028701191.1
XP_028701192.1
XP_028701193.1
XP_028701194.1
XP_028701195.1
XP_028701196.1
XP_028701197.1
XP_028701198.1
XP_028701199.1
XP_028701200.1
XP_028701201.1
XP_028701202.1
XP_028701203.1
XP_028701204.1
XP_028701205.1
XP_028701206.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    13796781..13899208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028845358.1 → XP_028701191.1  synaptojanin-1 isoform X1

    UniProtKB/TrEMBL
    G7MN18
    Conserved Domains (4) summary
    cd09098
    Location:575 → 910
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:909 → 1050
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1030 → 1501
    Atrophin-1; Atrophin-1 family

  2. XM_028845361.1 → XP_028701194.1  synaptojanin-1 isoform X4

    UniProtKB/TrEMBL
    G7MN18
    Related
    ENSMMUP00000072451.1, ENSMMUT00000097051.1
    Conserved Domains (4) summary
    cd09098
    Location:575 → 910
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:909 → 1050
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1052 → 1485
    Atrophin-1; Atrophin-1 family

  3. XM_028845363.1 → XP_028701196.1  synaptojanin-1 isoform X6

    UniProtKB/TrEMBL
    G7MN18
    Related
    ENSMMUP00000078958.1, ENSMMUT00000084814.1
    Conserved Domains (4) summary
    cd09098
    Location:575 → 910
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:909 → 1050
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1104 → 1472
    Atrophin-1; Atrophin-1 family

  4. XM_028845364.1 → XP_028701197.1  synaptojanin-1 isoform X9

    UniProtKB/TrEMBL
    G7MN18
    Conserved Domains (4) summary
    cd09098
    Location:575 → 910
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:909 → 1050
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1030 → 1459
    Atrophin-1; Atrophin-1 family

  5. XM_028845360.1 → XP_028701193.1  synaptojanin-1 isoform X3

    UniProtKB/TrEMBL
    G7MN18
    Conserved Domains (4) summary
    cd09098
    Location:567 → 902
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:901 → 1042
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1022 → 1493
    Atrophin-1; Atrophin-1 family

  6. XM_028845373.1 → XP_028701206.1  synaptojanin-1 isoform X19

    UniProtKB/TrEMBL
    H9F0W0
    Conserved Domains (4) summary
    cd09098
    Location:567 → 902
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:901 → 1042
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1022 → 1302
    Atrophin-1; Atrophin-1 family

  7. XM_028845365.1 → XP_028701198.1  synaptojanin-1 isoform X11

    UniProtKB/TrEMBL
    F6PZA6
    Related
    ENSMMUP00000006154.4, ENSMMUT00000006543.4
    Conserved Domains (4) summary
    cd09098
    Location:567 → 902
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:901 → 1042
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1022 → 1451
    Atrophin-1; Atrophin-1 family

  8. XM_028845369.1 → XP_028701202.1  synaptojanin-1 isoform X15

    UniProtKB/TrEMBL
    H9F0W0
    Conserved Domains (4) summary
    cd09098
    Location:572 → 907
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    PHA03247
    Location:1098 → 1348
    PHA03247; large tegument protein UL36; Provisional
    COG5329
    Location:73 → 519
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:906 → 1047
    DUF1866; Domain of unknown function (DUF1866)

  9. XM_028845359.1 → XP_028701192.1  synaptojanin-1 isoform X2

    UniProtKB/TrEMBL
    F7DSU6, G7MN18
    Related
    ENSMMUP00000035609.3, ENSMMUT00000042601.3
    Conserved Domains (4) summary
    cd09098
    Location:572 → 907
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 519
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:906 → 1047
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1027 → 1498
    Atrophin-1; Atrophin-1 family

  10. XM_028845362.1 → XP_028701195.1  synaptojanin-1 isoform X5

    UniProtKB/TrEMBL
    G7MN18
    Conserved Domains (4) summary
    cd09098
    Location:572 → 907
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:73 → 519
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:906 → 1047
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:1049 → 1482
    Atrophin-1; Atrophin-1 family

  11. XM_028845366.1 → XP_028701199.1  synaptojanin-1 isoform X13

    UniProtKB/TrEMBL
    H9F0W0
    Conserved Domains (4) summary
    cd09098
    Location:575 → 910
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    PHA03247
    Location:1101 → 1351
    PHA03247; large tegument protein UL36; Provisional
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:909 → 1050
    DUF1866; Domain of unknown function (DUF1866)

  12. XM_028845370.1 → XP_028701203.1  synaptojanin-1 isoform X16

    UniProtKB/TrEMBL
    G7MN18
    Conserved Domains (4) summary
    cd09098
    Location:575 → 910
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    PHA03247
    Location:1101 → 1335
    PHA03247; large tegument protein UL36; Provisional
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:909 → 1050
    DUF1866; Domain of unknown function (DUF1866)

  13. XM_028845371.1 → XP_028701204.1  synaptojanin-1 isoform X17

    UniProtKB/TrEMBL
    G7MN18
    Conserved Domains (4) summary
    cd09098
    Location:572 → 907
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    PHA03247
    Location:1098 → 1332
    PHA03247; large tegument protein UL36; Provisional
    COG5329
    Location:73 → 519
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:906 → 1047
    DUF1866; Domain of unknown function (DUF1866)

  14. XM_028845367.1 → XP_028701200.1  synaptojanin-1 isoform X14

    UniProtKB/TrEMBL
    H9F0W0
    Related
    ENSMMUP00000066633.1, ENSMMUT00000104438.1
    Conserved Domains (4) summary
    cd09098
    Location:575 → 910
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    PHA03247
    Location:1096 → 1352
    PHA03247; large tegument protein UL36; Provisional
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:909 → 1050
    DUF1866; Domain of unknown function (DUF1866)

  15. XM_028845368.1 → XP_028701201.1  synaptojanin-1 isoform X14

    UniProtKB/TrEMBL
    H9F0W0
    Conserved Domains (4) summary
    cd09098
    Location:575 → 910
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    PHA03247
    Location:1096 → 1352
    PHA03247; large tegument protein UL36; Provisional
    COG5329
    Location:73 → 522
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:909 → 1050
    DUF1866; Domain of unknown function (DUF1866)

  16. XM_015133003.2 → XP_014988489.2  synaptojanin-1 isoform X7

    UniProtKB/TrEMBL
    A0A5F8A514
    Conserved Domains (4) summary
    cd09098
    Location:536 → 871
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:34 → 483
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:870 → 1011
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:991 → 1462
    Atrophin-1; Atrophin-1 family

  17. XM_015133008.2 → XP_014988494.2  synaptojanin-1 isoform X10

    UniProtKB/TrEMBL
    A0A5F8A514
    Conserved Domains (4) summary
    cd09098
    Location:528 → 863
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:34 → 483
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:862 → 1003
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:983 → 1454
    Atrophin-1; Atrophin-1 family

  18. XM_015133012.2 → XP_014988498.2  synaptojanin-1 isoform X12

    UniProtKB/TrEMBL
    F6PZA6
    Related
    ENSMMUP00000065594.1, ENSMMUT00000096329.1
    Conserved Domains (4) summary
    cd09098
    Location:528 → 863
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:34 → 483
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:862 → 1003
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:983 → 1412
    Atrophin-1; Atrophin-1 family

  19. XM_015133007.2 → XP_014988493.2  synaptojanin-1 isoform X8

    UniProtKB/TrEMBL
    A0A5F8A514
    Conserved Domains (4) summary
    cd09098
    Location:533 → 868
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:34 → 480
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:867 → 1008
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:988 → 1459
    Atrophin-1; Atrophin-1 family

  20. XM_015133020.2 → XP_014988506.2  synaptojanin-1 isoform X20

    UniProtKB/TrEMBL
    H9F0W0
    Conserved Domains (5) summary
    cd09098
    Location:533 → 868
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    PHA03247
    Location:1059 → 1293
    PHA03247; large tegument protein UL36; Provisional
    COG5329
    Location:34 → 480
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    PRK05641
    Location:1017 → 1093
    PRK05641; putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
    pfam08952
    Location:867 → 1008
    DUF1866; Domain of unknown function (DUF1866)

  21. XM_015133004.2 → XP_014988490.2  synaptojanin-1 isoform X7

    UniProtKB/TrEMBL
    A0A5F8A514
    Conserved Domains (4) summary
    cd09098
    Location:536 → 871
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:34 → 483
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:870 → 1011
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:991 → 1462
    Atrophin-1; Atrophin-1 family

  22. XM_015133006.2 → XP_014988492.2  synaptojanin-1 isoform X7

    UniProtKB/TrEMBL
    A0A5F8A514
    Conserved Domains (4) summary
    cd09098
    Location:536 → 871
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    COG5329
    Location:34 → 483
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:870 → 1011
    DUF1866; Domain of unknown function (DUF1866)
    pfam03154
    Location:991 → 1462
    Atrophin-1; Atrophin-1 family

  23. XM_028845372.1 → XP_028701205.1  synaptojanin-1 isoform X18

    UniProtKB/TrEMBL
    A0A5F7ZXZ1
    Conserved Domains (4) summary
    cd09098
    Location:266 → 601
    INPP5c_Synj1; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
    PHA03247
    Location:792 → 1106
    PHA03247; large tegument protein UL36; Provisional
    COG5329
    Location:2 → 213
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:600 → 741
    DUF1866; Domain of unknown function (DUF1866)
Nucleotide Protein
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