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HPSE heparanase [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707583, updated on 17-Aug-2024

Summary

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Official Symbol
HPSEprovided by VGNC
Official Full Name
heparanaseprovided by VGNC
Primary source
VGNC:VGNC:73516
See related
Ensembl:ENSMMUG00000013342
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See HPSE in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (50324343..50367774)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (50980407..51023873)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106998327 Neighboring gene ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)-like Neighboring gene coenzyme Q2, polyprenyltransferase Neighboring gene aminomethyltransferase, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparanase
XP_001104975.2
XP_014993874.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    50324343..50367774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001104975.4 → XP_001104975.2  heparanase isoform X1

    UniProtKB/TrEMBL
    F6XCE6, G8F179
    Related
    ENSMMUP00000017538.4, ENSMMUT00000018725.4
    Conserved Domains (1) summary
    pfam03662
    Location:173 → 372
    Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain

  2. XM_015138388.2 → XP_014993874.2  heparanase isoform X2

    UniProtKB/TrEMBL
    G8F179
    Conserved Domains (1) summary
    pfam03662
    Location:111 → 310
    Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain
Nucleotide Protein
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Research Materials