U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SREBF1 sterol regulatory element binding transcription factor 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 706972, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SREBF1provided by VGNC
Official Full Name
sterol regulatory element binding transcription factor 1provided by VGNC
Primary source
VGNC:VGNC:77880
See related
Ensembl:ENSMMUG00000023375
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SREBF1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
21
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (17639918..17666518, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (17951339..17979375, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993928 Neighboring gene retinoic acid induced 1 Neighboring gene microRNA mir-33b Neighboring gene uncharacterized LOC114673070 Neighboring gene uncharacterized LOC106993911 Neighboring gene target of myb1 like 2 membrane trafficking protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sterol regulatory element-binding protein 1
Names
sterol regulatory element-binding protein 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    17639918..17666518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015118741.2 → XP_014974227.1  sterol regulatory element-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    H9EVZ1, H9ZCR8
    Conserved Domains (2) summary
    cd18921
    Location:317 → 391
    bHLHzip_SREBP1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein 1 (SREBP1) and similar proteins
    pfam03154
    Location:87 → 210
    Atrophin-1; Atrophin-1 family

  2. XM_015118744.2 → XP_014974230.1  sterol regulatory element-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A1D5QWQ4, H9EVZ1
    Related
    ENSMMUP00000052484.1, ENSMMUT00000078030.2
    Conserved Domains (3) summary
    pfam05109
    Location:86 → 350
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cd18921
    Location:349 → 423
    bHLHzip_SREBP1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein 1 (SREBP1) and similar proteins
    pfam03154
    Location:117 → 240
    Atrophin-1; Atrophin-1 family

  3. XM_015118740.2 → XP_014974226.1  sterol regulatory element-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    F7E4A8, H9EVZ1, I2CU70
    Related
    ENSMMUP00000030771.3, ENSMMUT00000032888.4
    Conserved Domains (3) summary
    pfam05109
    Location:56 → 320
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cd18921
    Location:319 → 393
    bHLHzip_SREBP1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein 1 (SREBP1) and similar proteins
    pfam03154
    Location:87 → 210
    Atrophin-1; Atrophin-1 family

  4. XM_028836066.1 → XP_028691899.1  sterol regulatory element-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    F6ZXA5, G7NJ20
    Related
    ENSMMUP00000012722.4, ENSMMUT00000013578.4
    Conserved Domains (3) summary
    pfam05109
    Location:25 → 289
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cd18921
    Location:288 → 362
    bHLHzip_SREBP1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein 1 (SREBP1) and similar proteins
    pfam03154
    Location:56 → 179
    Atrophin-1; Atrophin-1 family

  5. XM_015118743.2 → XP_014974229.1  sterol regulatory element-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    G7NJ20
    Conserved Domains (3) summary
    cd00083
    Location:295 → 352
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam15476
    Location:66 → 170
    SAP25; Histone deacetylase complex subunit SAP25
    pfam17040
    Location:102 → 300
    CBP_CCPA; Cellulose-complementing protein A

  6. XM_015118742.2 → XP_014974228.1  sterol regulatory element-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5RJ30, G7NJ20
    Related
    ENSMMUP00000060324.2, ENSMMUT00000070798.2
    Conserved Domains (3) summary
    cd00083
    Location:297 → 354
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam15476
    Location:66 → 170
    SAP25; Histone deacetylase complex subunit SAP25
    pfam17040
    Location:102 → 302
    CBP_CCPA; Cellulose-complementing protein A
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.