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LRTM1 leucine rich repeats and transmembrane domains 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 705947, updated on 17-Aug-2024

Summary

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Official Symbol
LRTM1provided by VGNC
Official Full Name
leucine rich repeats and transmembrane domains 1provided by VGNC
Primary source
VGNC:VGNC:82179
See related
Ensembl:ENSMMUG00000018417
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LRTM1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (111104619..111114600, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (87240385..87250573)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene selenoprotein K Neighboring gene calcium-binding tyrosine phosphorylation-regulated protein pseudogene Neighboring gene calcium voltage-gated channel auxiliary subunit alpha2delta 3 Neighboring gene uncharacterized LOC114676142 Neighboring gene uncharacterized LOC114676362

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and transmembrane domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    111104619..111114600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028844256.1 → XP_028700089.1  leucine-rich repeat and transmembrane domain-containing protein 1

    UniProtKB/TrEMBL
    F7HJD3
    Related
    ENSMMUP00000024222.3, ENSMMUT00000025885.4
    Conserved Domains (3) summary
    PRK15370
    Location:26 → 173
    PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
    sd00033
    Location:34 → 51
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:76 → 134
    LRR_8; Leucine rich repeat
Nucleotide Protein
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Molecular Biology Databases
Research Materials