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SJAG_00912 RNA-binding protein Tma20 [ Schizosaccharomyces japonicus yFS275 ]

Gene ID: 7052004, updated on 17-May-2024

Summary

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Gene symbol
SJAG_00912
Gene description
RNA-binding protein Tma20
Locus tag
SJAG_00912
See related
FungiDB:SJAG_00912; VEuPathDB:SJAG_00912
Gene type
protein coding
RNA name
RNA-binding protein Tma20
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces japonicus yFS275 (strain: yFS275)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SJAG_00912 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_011627860.1Genomic Context describing neighboring genes Neighboring gene F0-ATPase epsilon subunit Neighboring gene HIRA interacting protein Hip3 Neighboring gene hira protein Neighboring gene complexed with Cdc5 protein Cwf4 Neighboring gene zf-MYND type zinc finger protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011627860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by JaponicusDB

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in formation of translation preinitiation complex IEA
Inferred from Electronic Annotation
more info
  
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
RNA-binding protein Tma20

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011627860.1 Reference assembly

    Range
    2395556..2396362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002172145.2 → XP_002172181.2  RNA-binding protein Tma20 [Schizosaccharomyces japonicus yFS275]

    See identical proteins and their annotated locations for XP_002172181.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B6JWY7
    Conserved Domains (3) summary
    cd11609
    Location:4 → 80
    MCT1_N; N-terminal domain of multiple copies T cell malignancies 1 and related proteins
    COG2016
    Location:13 → 175
    Tma20; Predicted ribosome-associated RNA-binding protein Tma20, contains PUA domain [Translation, ribosomal structure and biogenesis]
    cl00607
    Location:62 → 173
    PUA; PUA domain
Nucleotide Protein
Heading Accession and Version

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