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ATXN1 ataxin 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702975, updated on 17-Aug-2024

Summary

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Official Symbol
ATXN1provided by VGNC
Official Full Name
ataxin 1provided by VGNC
Primary source
VGNC:VGNC:70045
See related
Ensembl:ENSMMUG00000002940
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ATXN1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (153210162..153670482)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (16636985..17098413, complement)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 24 Neighboring gene stathmin domain containing 1 Neighboring gene uncharacterized LOC106997811 Neighboring gene U6 spliceosomal RNA Neighboring gene guanosine monophosphate reductase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    153210162..153670482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028847816.1 → XP_028703649.1  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator

  2. XM_015135595.2 → XP_014991081.2  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator

  3. XM_015135601.2 → XP_014991087.2  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator

  4. XM_028847818.1 → XP_028703651.1  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator

  5. XM_015135597.2 → XP_014991083.2  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator

  6. XM_015135599.2 → XP_014991085.2  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator

  7. XM_028847819.1 → XP_028703652.1  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Related
    ENSMMUP00000077731.1, ENSMMUT00000080488.1
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator

  8. XM_028847817.1 → XP_028703650.1  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator

  9. XM_028847820.1 → XP_028703653.1  ataxin-1

    UniProtKB/TrEMBL
    A0A5F8AIJ7, F7H1M4
    Conserved Domains (2) summary
    smart00536
    Location:557 → 672
    AXH; domain in Ataxins and HMG containing proteins
    pfam12547
    Location:399 → 429
    ATXN-1_C; Capicua transcriptional repressor modulator
Nucleotide Protein
Heading Accession and Version

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