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PTPRN protein tyrosine phosphatase receptor type N [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702826, updated on 17-Aug-2024

Summary

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Official Symbol
PTPRNprovided by VGNC
Official Full Name
protein tyrosine phosphatase receptor type Nprovided by VGNC
Primary source
VGNC:VGNC:76620
See related
Ensembl:ENSMMUG00000012008
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PTPRN in Genome Data Viewer
Location:
chromosome: 12
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (106728013..106747860, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (101421018..101440839, complement)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-8 chain pseudogene Neighboring gene uncharacterized LOC114671426 Neighboring gene DnaJ heat shock protein family (Hsp40) member B2 Neighboring gene microRNA mir-153-1 Neighboring gene regulated endocrine specific protein 18 Neighboring gene aspartyl aminopeptidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase-like N
XP_014966610.2
XP_014966611.2
XP_028686968.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    106728013..106747860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015111125.2 → XP_014966611.2  receptor-type tyrosine-protein phosphatase-like N isoform X2

    UniProtKB/TrEMBL
    A0A5F7Z6Y0, G7N8Z8, H9EW26
    Related
    ENSMMUP00000061138.1, ENSMMUT00000099217.1
    Conserved Domains (4) summary
    PHA03247
    Location:131 → 468
    PHA03247; large tegument protein UL36; Provisional
    pfam14948
    Location:60 → 138
    RESP18; RESP18 domain
    pfam11548
    Location:469 → 557
    Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
    cd14609
    Location:693 → 973
    R-PTP-N; PTP-like domain of receptor-type tyrosine-protein phosphatase N

  2. XM_028831135.1 → XP_028686968.1  receptor-type tyrosine-protein phosphatase-like N isoform X3

    UniProtKB/TrEMBL
    G7N8Z8, H9EW26
    Conserved Domains (4) summary
    PHA03247
    Location:131 → 469
    PHA03247; large tegument protein UL36; Provisional
    pfam14948
    Location:60 → 138
    RESP18; RESP18 domain
    pfam11548
    Location:470 → 558
    Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
    cl28904
    Location:694 → 933
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  3. XM_015111124.2 → XP_014966610.2  receptor-type tyrosine-protein phosphatase-like N isoform X1

    UniProtKB/TrEMBL
    G7N8Z8, H9EW26
    Conserved Domains (4) summary
    PHA03247
    Location:131 → 469
    PHA03247; large tegument protein UL36; Provisional
    pfam14948
    Location:60 → 138
    RESP18; RESP18 domain
    pfam11548
    Location:470 → 558
    Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
    cd14609
    Location:694 → 974
    R-PTP-N; PTP-like domain of receptor-type tyrosine-protein phosphatase N
Nucleotide Protein
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