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3300002P09Rik RIKEN cDNA 3300002P09 gene [ Mus musculus (house mouse) ]

Gene ID: 70246, updated on 17-Aug-2024

Summary

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Official Symbol
3300002P09Rikprovided by MGI
Official Full Name
RIKEN cDNA 3300002P09 geneprovided by MGI
Primary source
MGI:MGI:1917496
See related
AllianceGenome:MGI:1917496
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See 3300002P09Rik in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (80234836..80237508)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene mex3 RNA binding family member D Neighboring gene predicted gene, 30823 Neighboring gene methyl-CpG binding domain protein 3 Neighboring gene STARR-positive B cell enhancer ABC_E5156 Neighboring gene ubiquinol-cytochrome c reductase, complex III subunit XI Neighboring gene transcription factor 3 Neighboring gene STARR-positive B cell enhancer ABC_E9795 Neighboring gene STARR-positive B cell enhancer ABC_E6881 Neighboring gene STARR-positive B cell enhancer ABC_E367

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000076.7 Chromosome 10 Reference GRCm39 C57BL/6J

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_190111.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC152062

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    80234836..80237508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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