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CNTNAP5 contactin associated protein family member 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 697828, updated on 17-Aug-2024

Summary

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Official Symbol
CNTNAP5provided by VGNC
Official Full Name
contactin associated protein family member 5provided by VGNC
Primary source
VGNC:VGNC:71210
See related
Ensembl:ENSMMUG00000019739
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CNTNAP5 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (6150094..7016072, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (6121389..6985921, complement)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671498 Neighboring gene U6 spliceosomal RNA Neighboring gene 26S proteasome non-ATPase regulatory subunit 14 pseudogene Neighboring gene uncharacterized LOC114671499

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
LOW QUALITY PROTEIN: contactin-associated protein-like 5
Names
contactin associated protein like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    6150094..7016072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015109883.2 → XP_014965369.2  LOW QUALITY PROTEIN: contactin-associated protein-like 5

    UniProtKB/TrEMBL
    F7AYT0
    Related
    ENSMMUP00000025951.4, ENSMMUT00000027742.4
    Conserved Domains (5) summary
    cd00054
    Location:961 → 996
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00057
    Location:34 → 173
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd00110
    Location:793 → 937
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam02210
    Location:209 → 338
    Laminin_G_2; Laminin G domain
    pfam00008
    Location:551 → 574
    EGF; EGF-like domain
Nucleotide Protein
Heading Accession and Version

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