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deaD ATP-dependent RNA helicase DeaD [ Klebsiella variicola ]

Gene ID: 69733252, updated on 26-Nov-2023

Summary

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Gene symbol
deaD
Gene description
ATP-dependent RNA helicase DeaD
Locus tag
GFC07_RS11470
Gene type
protein coding
Organism
Klebsiella variicola (strain: LEMB11)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella
Old locus tag
GFC07_11470
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Genomic context

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NZ_CP045783.1Genomic Context describing neighboring genes Neighboring gene LLM class flavin-dependent oxidoreductase Neighboring gene tryptophan permease Neighboring gene protein YrbN Neighboring gene lipoprotein NlpI Neighboring gene polyribonucleotide nucleotidyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP045783.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mutational analysis of the Escherichia coli DEAD box protein CsdA. Turner AM, et al. J Bacteriol, 2007 Apr. PMID 17259309, Free PMC Article
  2. CsdA, a cold-shock RNA helicase from Escherichia coli, is involved in the biogenesis of 50S ribosomal subunit. Charollais J, et al. Nucleic Acids Res, 2004. PMID 15148362, Free PMC Article
  3. Studies on three E. coli DEAD-box helicases point to an unwinding mechanism different from that of model DNA helicases. Bizebard T, et al. Biochemistry, 2004 Jun 22. PMID 15196029
  4. Physical and functional interactions among RNase E, polynucleotide phosphorylase and the cold-shock protein, CsdA: evidence for a 'cold shock degradosome'. Prud'homme-Généreux A, et al. Mol Microbiol, 2004 Dec. PMID 15554978
  5. Complete Genome Sequence of a Klebsiella pneumoniae Strain Isolated from a Known Cotton Insect Boll Vector. Medrano EG, et al. Genome Announc, 2014 Aug 21. PMID 25146146, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
ATP-dependent RNA helicase DeaD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP045783.1 Reference assembly

    Range
    2392690..2394621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012540481.1 MULTISPECIES: ATP-dependent RNA helicase DeaD [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_012540481.1

    UniProtKB/TrEMBL
    A0A087FVV6, B5XSY1
    Conserved Domains (1) summary
    PRK11634
    Location:1 → 643
    PRK11634; ATP-dependent RNA helicase DeaD; Provisional
Nucleotide Protein
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