PRPF18 pre-mRNA processing factor 18 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: PRPF18provided by VGNC
Official Full Name: pre-mRNA processing factor 18provided by VGNC
Primary source: VGNC:VGNC:106092
Locus tag: EGK_19466
See related: Ensembl:ENSMMUG00000015071
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	9	NC_041762.1 (14723372..14767988)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	9	NC_027901.1 (13653774..13698617)

Chromosome 9 - NC_041762.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in RNA splicing	IEA Inferred from Electronic Annotation more info	PubMed
involved_in generation of catalytic spliceosome for second transesterification step	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of U2-type post-spliceosomal complex	IEA Inferred from Electronic Annotation more info	PubMed
part_of U4/U6 x U5 tri-snRNP complex	IEA Inferred from Electronic Annotation more info	PubMed
part_of U5 snRNP	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: pre-mRNA-splicing factor 18

Names: PRP18 pre-mRNA processing factor 18 homolog; PRP18-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001260784.1 → NP_001247713.1 pre-mRNA-splicing factor 18

See identical proteins and their annotated locations for NP_001247713.1

Status: PROVISIONAL

Source sequence(s)

JV048539

UniProtKB/TrEMBL

A0A1D5Q8N9, A0A8J8XE66, F6WVX3, G7N1M0

Related

ENSMMUP00000019751.2, ENSMMUT00000021124.4

Conserved Domains (2) summary

smart00500
Location:79 → 122

SFM; Splicing Factor Motif, present in Prp18 and Pr04

pfam02840
Location:191 → 327

Prp18; Prp18 domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041762.1 Reference Mmul_10 Primary Assembly

Range

14723372..14767988

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015146470.2 → XP_015001956.1 pre-mRNA-splicing factor 18 isoform X1

UniProtKB/TrEMBL

A0A1D5Q8N9, F6WVW4

Related

ENSMMUP00000019753.3, ENSMMUT00000021126.4

Conserved Domains (2) summary

smart00500
Location:88 → 131

SFM; Splicing Factor Motif, present in Prp18 and Pr04

pfam02840
Location:200 → 336

Prp18; Prp18 domain