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TGDS TDP-glucose 4,6-dehydratase [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 694721, updated on 17-Aug-2024

Summary

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Official Symbol
TGDSprovided by VGNC
Official Full Name
TDP-glucose 4,6-dehydrataseprovided by VGNC
Primary source
VGNC:VGNC:79243
Locus tag
EGK_09406
See related
Ensembl:ENSMMUG00000013063
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TGDS in Genome Data Viewer
Location:
chromosome: 17
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (76358396..76380096, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (76235809..76257533, complement)

Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene dopachrome tautomerase Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene G protein-coupled receptor 180 Neighboring gene SRY-box transcription factor 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dTDP-glucose 4,6-dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-sugar metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dTDP-D-glucose 4,6-dehydratase
XP_001083495.1
XP_014976794.1
XP_014976796.1
XP_014976797.1
XP_028693044.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041770.1 Reference Mmul_10 Primary Assembly

    Range
    76358396..76380096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001083495.4 → XP_001083495.1  dTDP-D-glucose 4,6-dehydratase isoform X2

    See identical proteins and their annotated locations for XP_001083495.1

    UniProtKB/TrEMBL
    A0A5F7ZU59, A0A8J8Y1C0, G7NJH8, H9FS55
    Related
    ENSMMUP00000069194.1, ENSMMUT00000081994.1
    Conserved Domains (1) summary
    cd05246
    Location:18 → 336
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  2. XM_015121311.2 → XP_014976797.1  dTDP-D-glucose 4,6-dehydratase isoform X4

    UniProtKB/TrEMBL
    A0A5F7ZSS7, H9FS55
    Related
    ENSMMUP00000067707.1, ENSMMUT00000084377.1
    Conserved Domains (1) summary
    cd05246
    Location:18 → 306
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  3. XM_015121308.2 → XP_014976794.1  dTDP-D-glucose 4,6-dehydratase isoform X1

    UniProtKB/TrEMBL
    F7H5H9, H9FS55
    Related
    ENSMMUP00000017161.3, ENSMMUT00000018330.4
    Conserved Domains (1) summary
    cd05246
    Location:18 → 350
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  4. XM_028837211.1 → XP_028693044.1  dTDP-D-glucose 4,6-dehydratase isoform X5

    UniProtKB/TrEMBL
    H9FS55
    Conserved Domains (1) summary
    cd05246
    Location:1 → 304
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  5. XM_015121310.2 → XP_014976796.1  dTDP-D-glucose 4,6-dehydratase isoform X3

    UniProtKB/TrEMBL
    H9FS55
    Conserved Domains (2) summary
    cd05246
    Location:1 → 318
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs
    TIGR01181
    Location:2 → 320
    dTDP_gluc_dehyt; dTDP-glucose 4,6-dehydratase

RNA

  1. XR_001440897.2 RNA Sequence

  2. XR_003724149.1 RNA Sequence

  3. XR_003724148.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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