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STAMBPL1 STAM binding protein like 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 694629, updated on 17-Aug-2024

Summary

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Official Symbol
STAMBPL1provided by VGNC
Official Full Name
STAM binding protein like 1provided by VGNC
Primary source
VGNC:VGNC:77982
See related
Ensembl:ENSMMUG00000009339
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See STAMBPL1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (89142359..89188327)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (84056925..84104398)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene RCC1 and BTB domain-containing protein 2-like Neighboring gene lipase family member M Neighboring gene ankyrin repeat domain 22 Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal-dependent deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AMSH-like protease
NP_001247946.1
XP_028709085.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261017.1 → NP_001247946.1  AMSH-like protease

    See identical proteins and their annotated locations for NP_001247946.1

    Status: PROVISIONAL

    Source sequence(s)
    JU321699
    UniProtKB/TrEMBL
    F7EC45, F7HJK2
    Related
    ENSMMUP00000035777.1, ENSMMUT00000042767.3
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    COG0544
    Location:119 → 197
    Tig; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
    pfam08969
    Location:22 → 129
    USP8_dimer; USP8 dimerization domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    89142359..89188327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028853252.1 → XP_028709085.1  AMSH-like protease isoform X1

    UniProtKB/TrEMBL
    F7EC45, F7HJK2
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    COG0544
    Location:119 → 197
    Tig; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
    pfam08969
    Location:22 → 129
    USP8_dimer; USP8 dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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