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Fam24b family with sequence similarity 24 member B [ Mus musculus (house mouse) ]

Gene ID: 69318, updated on 30-Apr-2024

Summary

Official Symbol
Fam24bprovided by MGI
Official Full Name
family with sequence similarity 24 member Bprovided by MGI
Primary source
MGI:MGI:1916568
See related
Ensembl:ENSMUSG00000030858 AllianceGenome:MGI:1916568
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700007K09Rik
Summary
Predicted to be located in extracellular region. Orthologous to human FAM24B (family with sequence similarity 24 member B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 57.1) See more
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Genomic context

See Fam24b in Genome Data Viewer
Location:
7 F3; 7 73.84 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (130927136..130933163, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (131325930..131331434, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene CUB domain containing protein 3 Neighboring gene deleted in malignant brain tumors 1 pseudogene Neighboring gene CUB and zona pellucida-like domains 1 Neighboring gene RIKEN cDNA 2310057M21 gene Neighboring gene family with sequence similarity 24, member A Neighboring gene STARR-positive B cell enhancer ABC_E9713

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027037.2NP_081313.1  protein FAM24A-like precursor

    See identical proteins and their annotated locations for NP_081313.1

    Status: VALIDATED

    Source sequence(s)
    AC156606, BC048596
    Consensus CDS
    CCDS21912.1
    UniProtKB/Swiss-Prot
    Q9DAL9
    Related
    ENSMUSP00000139545.2, ENSMUST00000188899.2
    Conserved Domains (1) summary
    pfam15193
    Location:33119
    FAM24; FAM24 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    130927136..130933163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006508181.3XP_006508244.2  protein FAM24A-like isoform X1

    Conserved Domains (1) summary
    pfam15193
    Location:77163
    FAM24; FAM24 family