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SNORD103A small nucleolar RNA, C/D box 103A [ Homo sapiens (human) ]

Gene ID: 692234, updated on 2-Nov-2024

Summary

Official Symbol
SNORD103Aprovided by HGNC
Official Full Name
small nucleolar RNA, C/D box 103Aprovided by HGNC
Primary source
HGNC:HGNC:32766
See related
AllianceGenome:HGNC:32766
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U103
Summary
Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See SNORD103A in Genome Data Viewer
Location:
1p35.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (30935689..30935776, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (30787946..30788033, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (31408536..31408623, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:31343383-31344254 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 561 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 562 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:31358623-31359123 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 635 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 636 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:31363707-31364422 Neighboring gene syndecan 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:31368603-31369362 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 563 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:31392155-31393153 Neighboring gene RNA, 7SL, cytoplasmic 371, pseudogene Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:31424624-31425823 Neighboring gene pumilio RNA binding family member 1 Neighboring gene small nucleolar RNA, C/D box 103B Neighboring gene small nucleolar RNA, C/D box 103C

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_004054.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AY349604

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    30935689..30935776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    30787946..30788033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)