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Zfp758 zinc finger protein 758 [ Rattus norvegicus (Norway rat) ]

Gene ID: 690559, updated on 2-Nov-2024

Summary

Official Symbol
Zfp758provided by RGD
Official Full Name
zinc finger protein 758provided by RGD
Primary source
RGD:1594701
See related
EnsemblRapid:ENSRNOG00000051867 AllianceGenome:RGD:1594701
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Zfp28
Summary
Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Thymus (RPKM 71.4), Lung (RPKM 68.2) and 9 other tissues See more
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Genomic context

See Zfp758 in Genome Data Viewer
Location:
1q12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (70614167..70662261, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (61941284..61989354, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (38727137..38773604)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 845 like, pseudogene 1 Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene vomeronasal 2 receptor, 12 Neighboring gene vomeronasal 2 receptor, pseudogene 25

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
zinc finger protein 260-like
Names
zinc finger protein 28

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    70614167..70662261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063277058.1XP_063133128.1  zinc finger protein 260-like

    UniProtKB/TrEMBL
    A0A0G2JV23
  2. XM_006228088.5XP_006228150.1  zinc finger protein 260-like

    See identical proteins and their annotated locations for XP_006228150.1

    UniProtKB/TrEMBL
    A0A0G2JV23
    Related
    ENSRNOP00000069321.1, ENSRNOT00000081537.3
    Conserved Domains (5) summary
    smart00349
    Location:1355
    KRAB; krueppel associated box
    COG5048
    Location:209634
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:269289
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:1352
    KRAB; KRAB box
    pfam13465
    Location:253278
    zf-H2C2_2; Zinc-finger double domain
  3. XM_063277062.1XP_063133132.1  zinc finger protein 260-like

    UniProtKB/TrEMBL
    A0A0G2JV23