U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C1h11orf98 similar to human chromosome 11 open reading frame 98 [ Rattus norvegicus (Norway rat) ]

Gene ID: 690349, updated on 17-Aug-2024

Summary

Official Symbol
C1h11orf98provided by RGD
Official Full Name
similar to human chromosome 11 open reading frame 98provided by RGD
Primary source
RGD:1597339
See related
EnsemblRapid:ENSRNOG00000019701 AllianceGenome:RGD:1597339
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Lbhd1; RGD1304652; RGD1597339
Summary
Orthologous to human C11orf98 (chromosome 11 open reading frame 98). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Thymus (RPKM 240.6), Spleen (RPKM 176.3) and 9 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See C1h11orf98 in Genome Data Viewer
Location:
1q43
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (215211658..215213687)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (205782612..205784578)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (225080183..225087291)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene ubiquinol-cytochrome c reductase complex assembly factor 3 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene uncharacterized LOC102551607 Neighboring gene integrator complex subunit 5 Neighboring gene glucosidase II alpha subunit

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
uncharacterized protein C11orf98 homolog
Names
LBH domain containing 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109581.2NP_001103051.2  uncharacterized protein C11orf98 homolog

    See identical proteins and their annotated locations for NP_001103051.2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A0A8I5Y8U8, A6HZX0, A6HZX1, D4AAM1
    Related
    ENSRNOP00000040218.3, ENSRNOT00000039991.6

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    215211658..215213687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063274763.1XP_063130833.1  uncharacterized protein C11orf98 homolog isoform X1