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Glg1 golgi glycoprotein 1 [ Drosophila pseudoobscura ]

Gene ID: 6900275, updated on 23-May-2024

Summary

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Gene symbol
Glg1
Gene description
golgi glycoprotein 1
See related
EnsemblRapid:LOC6900275
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Glg1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) X NC_046683.1 (61320027..61327088)

Chromosome X - NC_046683.1Genomic Context describing neighboring genes Neighboring gene 4-hydroxyphenylpyruvate dioxygenase Neighboring gene uncharacterized LOC4812281 Neighboring gene presenilin homolog Neighboring gene mitochondrial ribosomal protein L15 Neighboring gene esterase B1 Neighboring gene Hormone-receptor-like in 78 Neighboring gene protein PBDC1 Neighboring gene uncharacterized LOC6900274

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046683.1 Chromosome X Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura. Palmieri N, et al. PLoS One, 2012. PMID 23056304, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fibroblast growth factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Golgi apparatus protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046683.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    61320027..61327088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015188568.2 → XP_015044054.2  Golgi apparatus protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6I8VM09
    Related
    XP_015044054.2, XM_015188568.2
    Conserved Domains (1) summary
    pfam00839
    Location:850 → 912
    Cys_rich_FGFR; Cysteine rich repeat

  2. XM_002135567.3 → XP_002135603.2  Golgi apparatus protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6I8V1L1
    Related
    XP_002135603.2, XM_002135567.3
    Conserved Domains (1) summary
    pfam00839
    Location:846 → 908
    Cys_rich_FGFR; Cysteine rich repeat
Nucleotide Protein Strain
Heading Accession and Version

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