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CBG29121 Protein CBG29121 [ Caenorhabditis briggsae ]

Gene ID: 68920376, updated on 6-Jun-2024

Summary

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Gene symbol
CBG29121
Gene description
Protein CBG29121
Locus tag
CBG_29121
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See CBG29121 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_013488.2 (9301154..9303288, complement)

Chromosome V - NC_013488.2Genomic Context describing neighboring genes Neighboring gene Protein CBR-DAF-11 Neighboring gene Protein CBR-RHR-2 Neighboring gene Protein CBR-SPE-42 Neighboring gene Protein CBG23277

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013488.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear pore organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore transmembrane ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG29121
XP_045100867.1
  • contains similarity to Pfam domain PF09531 Nucleoporin protein Ndc1-Nup contains similarity to Interpro domain IPR019049 (Nucleoporin protein Ndc1-Nup);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013488.2 Reference assembly

    Range
    9301154..9303288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045237493.1 → XP_045100867.1  Protein CBG29121 [Caenorhabditis briggsae]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A8Y4A5, H8WHD0, Q60M68
    UniProtKB/TrEMBL
    A0AAE8ZY25, A0AAE9F549
    Conserved Domains (1) summary
    pfam09531
    Location:322 → 580
    Ndc1_Nup; Nucleoporin protein Ndc1-Nup
Nucleotide Protein
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