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Acp7 acid phosphatase 7, tartrate resistant [ Rattus norvegicus (Norway rat) ]

Gene ID: 687403, updated on 2-Nov-2024

Summary

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Symbol
Acp7provided by RGD
Full Name
acid phosphatase 7, tartrate resistantprovided by RGD
Primary source
RGD:1585399
See related
EnsemblRapid:ENSRNOG00000047901 AllianceGenome:RGD:1585399
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Papl
Summary
Predicted to enable acid phosphatase activity and metal ion binding activity. Orthologous to human ACP7 (acid phosphatase 7, tartrate resistant (putative)). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Lung (RPKM 6.4), Testes (RPKM 1.7) and 2 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Acp7 in Genome Data Viewer
Location:
1q21
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (93022801..93048484, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (83896485..83923436, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (85141383..85162449)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene NCCRP1, F-box associated domain containing Neighboring gene MARCKS-related protein-like Neighboring gene uncharacterized LOC108349512 Neighboring gene p21 (RAC1) activated kinase 4 Neighboring gene ribosomal protein SA, pseudogene 8 Neighboring gene F-box protein 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables acid phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acid phosphatase 7, tartrate resistant; acid phosphatase type 7
Names
acid phosphatase type 7-like
iron/zinc purple acid phosphatase
iron/zinc purple acid phosphatase-like protein
iron/zinc purple acid phosphatase-like protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001432592.1 → NP_001419521.1  acid phosphatase 7, tartrate resistant precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    M0RCA8

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    93022801..93048484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039100849.2 → XP_038956777.1  acid phosphatase type 7

    Related
    ENSRNOP00000110707.1, ENSRNOT00000167520.1
    Conserved Domains (2) summary
    cd00839
    Location:130 → 428
    MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
    pfam16656
    Location:31 → 123
    Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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