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Mea1 male-enhanced antigen 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 685131, updated on 2-Nov-2024

Summary

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Official Symbol
Mea1provided by RGD
Official Full Name
male-enhanced antigen 1provided by RGD
Primary source
RGD:1597751
See related
EnsemblRapid:ENSRNOG00000017144 AllianceGenome:RGD:1597751
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be involved in cell differentiation and spermatogenesis. Predicted to be located in cytoplasm. Orthologous to human MEA1 (male-enhanced antigen 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Testes (RPKM 677.6), Muscle (RPKM 396.2) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Mea1 in Genome Data Viewer
Location:
9q12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (21797884..21801693, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (14300283..14304130, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (16610312..16614153, complement)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene canopy FGF signaling regulator 3 Neighboring gene glycine N-methyltransferase Neighboring gene peroxisomal biogenesis factor 6 Neighboring gene protein phosphatase 2, regulatory subunit B', delta Neighboring gene kelch domain containing 3 Neighboring gene ribosomal RNA processing 36 Neighboring gene cullin 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Male-enhanced antigen-1 gene flanked by two overlapping genes is expressed in late spermatogenesis. Ohinata Y, et al. Biol Reprod, 2002 Dec. PMID 12444059
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC109389

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
  
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
male-enhanced antigen 1
Names
MEA-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001044286.1 → NP_001037751.1  male-enhanced antigen 1

    See identical proteins and their annotated locations for NP_001037751.1

    Status: PROVISIONAL

    Source sequence(s)
    BC089978
    UniProtKB/Swiss-Prot
    Q5FVH7
    UniProtKB/TrEMBL
    A0A0G2JV28
    Related
    ENSRNOP00000023495.2, ENSRNOT00000023495.6
    Conserved Domains (1) summary
    pfam06910
    Location:54 → 170
    MEA1; Male enhanced antigen 1 (MEA1)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    21797884..21801693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008766880.3 → XP_008765102.1  male-enhanced antigen 1 isoform X1

    See identical proteins and their annotated locations for XP_008765102.1

    UniProtKB/Swiss-Prot
    Q5FVH7
    UniProtKB/TrEMBL
    A0A0G2JV28
    Conserved Domains (1) summary
    pfam06910
    Location:54 → 170
    MEA1; Male enhanced antigen 1 (MEA1)

  2. XM_006244569.5 → XP_006244631.1  male-enhanced antigen 1 isoform X1

    See identical proteins and their annotated locations for XP_006244631.1

    UniProtKB/Swiss-Prot
    Q5FVH7
    UniProtKB/TrEMBL
    A0A0G2JV28
    Conserved Domains (1) summary
    pfam06910
    Location:54 → 170
    MEA1; Male enhanced antigen 1 (MEA1)

  3. XM_006244567.5 → XP_006244629.1  male-enhanced antigen 1 isoform X1

    See identical proteins and their annotated locations for XP_006244629.1

    UniProtKB/Swiss-Prot
    Q5FVH7
    UniProtKB/TrEMBL
    A0A0G2JV28
    Conserved Domains (1) summary
    pfam06910
    Location:54 → 170
    MEA1; Male enhanced antigen 1 (MEA1)

  4. XM_006244568.5 → XP_006244630.1  male-enhanced antigen 1 isoform X1

    See identical proteins and their annotated locations for XP_006244630.1

    UniProtKB/Swiss-Prot
    Q5FVH7
    UniProtKB/TrEMBL
    A0A0G2JV28
    Conserved Domains (1) summary
    pfam06910
    Location:54 → 170
    MEA1; Male enhanced antigen 1 (MEA1)

  5. XM_039084216.2 → XP_038940144.1  male-enhanced antigen 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5FVH7
    UniProtKB/TrEMBL
    A0A0G2JV28
    Conserved Domains (1) summary
    pfam06910
    Location:54 → 170
    MEA1; Male enhanced antigen 1 (MEA1)

  6. XM_039084215.2 → XP_038940143.1  male-enhanced antigen 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5FVH7
    UniProtKB/TrEMBL
    A0A0G2JV28
    Conserved Domains (1) summary
    pfam06910
    Location:54 → 170
    MEA1; Male enhanced antigen 1 (MEA1)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5FVH7.1 GenPept UniProtKB/Swiss-Prot:Q5FVH7

Gene LinkOut

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