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TRIADDRAFT_53993 uncharacterized protein [ Trichoplax adhaerens ]

Gene ID: 6751434, updated on 17-Feb-2024

Summary

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Gene symbol
TRIADDRAFT_53993
Gene description
uncharacterized protein
Locus tag
TRIADDRAFT_53993
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichoplax adhaerens (strain: Grell-BS-1999)
Lineage
Eukaryota; Metazoa; Placozoa; Uniplacotomia; Trichoplacea; Trichoplacidae; Trichoplax
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Genomic context

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See TRIADDRAFT_53993 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
21

NW_002060944.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002060944.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Trichoplax genome and the nature of placozoans. Srivastava M, et al. Nature, 2008 Aug 21. PMID 18719581
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ornithine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in putrescine biosynthetic process from ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_002110219.1
  • similar to arginine decarboxylase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002060944.1 Reference assembly

    Range
    9732623..9739499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002110183.1 → XP_002110219.1  uncharacterized protein TRIADDRAFT_53993 [Trichoplax adhaerens]

    See identical proteins and their annotated locations for XP_002110219.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B3RML7
    Conserved Domains (3) summary
    cd00622
    Location:132 → 480
    PLPDE_III_ODC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase
    PLN02537
    Location:135 → 493
    PLN02537; diaminopimelate decarboxylase
    cl00261
    Location:7 → 87
    PLPDE_III; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes
Nucleotide Protein
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Research Materials