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RSKD131_RS06090 holin-associated N-acetylmuramidase [ Cereibacter sphaeroides KD131 ]

Gene ID: 67446686, updated on 15-Apr-2023

Summary

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Gene symbol
RSKD131_RS06090
Gene description
holin-associated N-acetylmuramidase
Locus tag
RSKD131_RS06090
Gene type
protein coding
Organism
Cereibacter sphaeroides KD131 (strain: KD131; KCTC 12085)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Cereibacter
Old locus tag
RSKD131_1264
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Genomic context

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Location:
chromosome: 1
Sequence:
Chromosome: 1; NC_011963.1 (1290435..1291046, complement)

Chromosome 1 - NC_011963.1Genomic Context describing neighboring genes Neighboring gene glycoside hydrolase family 3 N-terminal domain-containing protein Neighboring gene SPOR domain-containing protein Neighboring gene arginine--tRNA ligase Neighboring gene holin family protein Neighboring gene cytochrome c maturation protein CcmE Neighboring gene N-acetyl-gamma-glutamyl-phosphate reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011963.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Rhodobacter sphaeroides KD131. Lim SK, et al. J Bacteriol, 2009 Feb. PMID 19028901, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
holin-associated N-acetylmuramidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011963.1 Reference assembly

    Range
    1290435..1291046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015920628.1 holin-associated N-acetylmuramidase [Cereibacter sphaeroides]

    See identical proteins and their annotated locations for WP_015920628.1

    Conserved Domains (2) summary
    pfam05838
    Location:8 → 97
    Glyco_hydro_108; Glycosyl hydrolase 108
    pfam09374
    Location:100 → 181
    PG_binding_3; Predicted Peptidoglycan domain
Nucleotide Protein
Heading Accession and Version