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Fgf22 fibroblast growth factor 22 [ Mus musculus (house mouse) ]

Gene ID: 67112, updated on 2-Nov-2024

Summary

Official Symbol
Fgf22provided by MGI
Official Full Name
fibroblast growth factor 22provided by MGI
Primary source
MGI:MGI:1914362
See related
Ensembl:ENSMUSG00000020327 AllianceGenome:MGI:1914362
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fgf5d; FGF-22; 2210414E06Rik
Summary
Predicted to enable fibroblast growth factor receptor binding activity and growth factor activity. Involved in regulation of synapse maturation and trans-synaptic signaling. Located in Golgi apparatus; cell surface; and nucleolus. Is active in GABA-ergic synapse; glutamatergic synapse; and postsynapse. Is extrinsic component of postsynaptic density membrane. Is expressed in brain; early conceptus; gonad; spinal cord; and tongue. Orthologous to human FGF22 (fibroblast growth factor 22). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in cerebellum adult (RPKM 1.6), cortex adult (RPKM 1.1) and 17 other tissues See more
Orthologs
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Genomic context

See Fgf22 in Genome Data Viewer
Location:
10 C1; 10 39.72 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (79590887..79593629)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (79755051..79757795)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene hyperpolarization-activated, cyclic nucleotide-gated K+ 2 Neighboring gene polymerase (RNA) mitochondrial (DNA directed) Neighboring gene STARR-positive B cell enhancer ABC_E3897 Neighboring gene ring finger protein 126 Neighboring gene STARR-positive B cell enhancer ABC_E899 Neighboring gene STARR-positive B cell enhancer ABC_E719 Neighboring gene follistatin-like 3 Neighboring gene serine protease 57

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables fibroblast growth factor receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables growth factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in fibroblast growth factor receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neurogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of MAPK cascade IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of cell population proliferation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of cell migration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of synapse maturation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of synapse maturation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in trans-synaptic signaling IDA
Inferred from Direct Assay
more info
PubMed 
involved_in trans-synaptic signaling IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in GABA-ergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in GABA-ergic synapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
NOT located_in extracellular region IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in extrinsic component of postsynaptic density membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in extrinsic component of postsynaptic density membrane IMP
Inferred from Mutant Phenotype
more info
PubMed 
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in glutamatergic synapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in postsynapse IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in postsynapse IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
fibroblast growth factor 22
Names
fibroblast growth factor 5d

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001368662.2NP_001355591.1  fibroblast growth factor 22 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC151828
    Consensus CDS
    CCDS88050.1
    UniProtKB/TrEMBL
    Q0VER9
    Related
    ENSMUSP00000151917.2, ENSMUST00000219981.2
    Conserved Domains (1) summary
    cl00060
    Location:3497
    FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...
  2. NM_001429407.1NP_001416336.1  fibroblast growth factor 22 isoform 3 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) encodes the longest isoform (3).
    Source sequence(s)
    AC151828
  3. NM_023304.3NP_075793.1  fibroblast growth factor 22 isoform 1 precursor

    See identical proteins and their annotated locations for NP_075793.1

    Status: VALIDATED

    Source sequence(s)
    AC151828
    Consensus CDS
    CCDS23988.1
    UniProtKB/Swiss-Prot
    Q9ESS2
    UniProtKB/TrEMBL
    A0A7U3JW52
    Related
    ENSMUSP00000151743.2, ENSMUST00000219228.2
    Conserved Domains (1) summary
    pfam00167
    Location:32156
    FGF; Fibroblast growth factor

RNA

  1. NR_190732.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC151828
  2. NR_190733.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC151828

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    79590887..79593629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030245228.2XP_030101088.1  fibroblast growth factor 22 isoform X1

    Related
    ENSMUSP00000020577.4, ENSMUST00000020577.4
    Conserved Domains (1) summary
    cl00060
    Location:3497
    FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...