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SSO2 plasma membrane t-SNARE, secretory vesicle fusion [ Aspergillus chevalieri ]

Gene ID: 66986145, updated on 31-Oct-2024

Summary

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Gene symbol
SSO2
Gene description
plasma membrane t-SNARE, secretory vesicle fusion
Locus tag
ACHE_70630A
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus chevalieri (strain: M1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
Orthologs
Aspergillus fumigatus all
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Genomic context

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See SSO2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Sequence:
Chromosome: 7; NC_057368.1 (1856661..1857783, complement)

Chromosome 7 - NC_057368.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene eukaryotic translation initiation factor 4E

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057368.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma membrane t-SNARE, secretory vesicle fusion
XP_043140309.1
  • COG:U;
    EggNog:ENOG410PK20;
    InterPro:IPR006011,IPR010989,IPR000727;
    PFAM:PF05739,PF00804;
    TransMembrane:1 (i284-304o);
    go_component: GO:0016020 - membrane [Evidence IEA];
    go_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_057368.1 Reference assembly

    Range
    1856661..1857783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043282984.1 → XP_043140309.1  plasma membrane t-SNARE, secretory vesicle fusion [Aspergillus chevalieri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7R7ZSU9
    Conserved Domains (1) summary
    COG5074
    Location:32 → 284
    COG5074; t-SNARE complex subunit, syntaxin [Intracellular trafficking, secretion, and vesicular transport]
Nucleotide Protein
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