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RPS4 40S ribosomal protein S4 [ Aspergillus chevalieri ]

Gene ID: 66985910, updated on 31-Oct-2024

Summary

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Gene symbol
RPS4
Gene description
40S ribosomal protein S4
Locus tag
ACHE_70395A
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus chevalieri (strain: M1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
Orthologs
Aspergillus fumigatus all
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Genomic context

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See RPS4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Sequence:
Chromosome: 7; NC_057368.1 (1188968..1190202, complement)

Chromosome 7 - NC_057368.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057368.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S4
XP_043140074.1
  • COG:J;
    EggNog:ENOG410PFCX;
    InterPro:IPR041982,IPR032277,IPR038237,IPR000876, IPR002942,IPR018199,IPR013843,IPR013845,IPR014722;
    PFAM:PF00900,PF08071,PF01479,PF16121;
    go_component: GO:0005840 - ribosome [Evidence IEA];
    go_function: GO:0003723 - RNA binding [Evidence IEA];
    go_function: GO:0003735 - structural constituent of ribosome [Evidence IEA];
    go_process: GO:0006412 - translation [Evidence IEA]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_057368.1 Reference assembly

    Range
    1188968..1190202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043282723.1 → XP_043140074.1  40S ribosomal protein S4 [Aspergillus chevalieri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7R7VVH8
    Conserved Domains (1) summary
    PLN00036
    Location:1 → 256
    PLN00036; 40S ribosomal protein S4; Provisional
Nucleotide Protein
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