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RPB4 RNA polymerase B [ Aspergillus chevalieri ]

Gene ID: 66985690, updated on 11-Apr-2024

Summary

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Gene symbol
RPB4
Gene description
RNA polymerase B
Locus tag
ACHE_70175A
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus chevalieri (strain: M1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
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Genomic context

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See RPB4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Sequence:
Chromosome: 7; NC_057368.1 (547798..548372, complement)

Chromosome 7 - NC_057368.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene fungal specific transcription factor Neighboring gene tRNA-Ser Neighboring gene tRNA(m(1)G37)methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057368.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus in response to heat stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase B
XP_043139854.1
  • BUSCO:EOG09264ZI5;
    COG:K;
    EggNog:ENOG410PP7T;
    InterPro:IPR006590,IPR010997,IPR038324,IPR005574;
    PFAM:PF03874;
    go_component: GO:0030880 - RNA polymerase complex [Evidence IEA];
    go_function: GO:0000166 - nucleotide binding [Evidence IEA];
    go_process: GO:0006352 - DNA-templated transcription, initiation [Evidence IEA];
    go_process: GO:0044237 - cellular metabolic process [Evidence IEA]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_057368.1 Reference assembly

    Range
    547798..548372 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043282479.1 → XP_043139854.1  RNA polymerase B [Aspergillus chevalieri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7R7VV23
    Conserved Domains (1) summary
    cl00638
    Location:19 → 146
    RNA_pol_Rpb4; RNA polymerase Rpb4
Nucleotide Protein
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