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AMD14_RS17365 phosphoglycerate kinase [ Xanthomonas citri pv. citri ]

Gene ID: 66912397, updated on 6-Jun-2024

Summary

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Gene symbol
AMD14_RS17365
Gene description
phosphoglycerate kinase
Locus tag
AMD14_RS17365
Gene type
protein coding
Organism
Xanthomonas citri pv. citri (strain: MN12, pathovar: citri, nat-host: citrus spp., sub-species: citri)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
Old locus tag
J164_03506; J164_RS17410
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Genomic context

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NZ_CP008998.1Genomic Context describing neighboring genes Neighboring gene class I fructose-bisphosphate aldolase Neighboring gene pyruvate kinase Neighboring gene HAD family hydrolase Neighboring gene pseudo Neighboring gene DUF2339 domain-containing protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP008998.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phosphoglycerate kinase abnormalities: functional, structural and genomic aspects. Yoshida A, et al. Biomed Biochim Acta, 1983. PMID 6689547
  2. Molecular insights on pathogenic effects of mutations causing phosphoglycerate kinase deficiency. Chiarelli LR, et al. PLoS One, 2012. PMID 22348148, Free PMC Article
  3. Flexibility and folding of phosphoglycerate kinase. Yon JM, et al. Biochimie, 1990 Jun-Jul. PMID 2124145
  4. Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas. Zhang Y, et al. ISME J, 2015 Oct. PMID 25689023, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
phosphoglycerate kinase
WP_005922388.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP008998.1 Reference assembly

    Range
    3919961..3921136 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005922388.1 MULTISPECIES: phosphoglycerate kinase [Xanthomonas]

    UniProtKB/Swiss-Prot
    Q8PHB2
    UniProtKB/TrEMBL
    A0A0U5FP68, A0A1T1NSW6, A0A7S6YXL2, A0A9X6BF16, A0AA44YYU8
    Conserved Domains (1) summary
    PRK00073
    Location:3 → 388
    pgk; phosphoglycerate kinase; Provisional
Nucleotide Protein
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