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cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [ Xanthomonas citri pv. citri ]

Gene ID: 66912250, updated on 7-May-2024

Summary

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Gene symbol
cobT
Gene description
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Locus tag
AMD14_RS16555
Gene type
protein coding
Organism
Xanthomonas citri pv. citri (strain: MN12, pathovar: citri, nat-host: citrus spp., sub-species: citri)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
Old locus tag
J164_03343; J164_RS16600
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Genomic context

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NZ_CP008998.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene adenosylcobinamide-GDP ribazoletransferase Neighboring gene alpha-ribazole phosphatase family protein Neighboring gene cobyric acid synthase Neighboring gene bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase Neighboring gene threonine-phosphate decarboxylase CobD Neighboring gene adenosylcobinamide-phosphate synthase CbiB

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP008998.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural investigation of the biosynthesis of alternative lower ligands for cobamides by nicotinate mononucleotide: 5,6-dimethylbenzimidazole phosphoribosyltransferase from Salmonella enterica. Cheong CG, et al. J Biol Chem, 2001 Oct 5. PMID 11441022
  2. Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas. Zhang Y, et al. ISME J, 2015 Oct. PMID 25689023, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
WP_011052091.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP008998.1 Reference assembly

    Range
    3725699..3726745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011052091.1 MULTISPECIES: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [Xanthomonas]

    See identical proteins and their annotated locations for WP_011052091.1

    UniProtKB/Swiss-Prot
    Q8PHR3
    UniProtKB/TrEMBL
    A0A0U5GCA8, A0A7S6YV63, A0A9X9IC80, M4UE04
    Conserved Domains (1) summary
    PRK00105
    Location:13 → 347
    cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Reviewed
Nucleotide Protein
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