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Zfp133-ps zinc finger protein 133, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 668917, updated on 22-Oct-2024

Summary

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Official Symbol
Zfp133-psprovided by MGI
Official Full Name
zinc finger protein 133, pseudogeneprovided by MGI
Primary source
MGI:MGI:2176612
See related
Ensembl:ENSMUSG00000121866 AllianceGenome:MGI:2176612
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Zfp133; Gm38402
Expression
Broad expression in CNS E14 (RPKM 2.5), whole brain E14.5 (RPKM 2.3) and 22 other tissues See more
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Genomic context

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See Zfp133-ps in Genome Data Viewer
Location:
2 G1; 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (144301200..144309714)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (144459280..144467794)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_05912 Neighboring gene PET117 homolog Neighboring gene lysine acetyltransferase 14 Neighboring gene STARR-seq mESC enhancer starr_05913 Neighboring gene predicted gene, 46768 Neighboring gene STARR-seq mESC enhancer starr_05917 Neighboring gene double zinc ribbon and ankyrin repeat domains 1 Neighboring gene STARR-seq mESC enhancer starr_05918 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide F

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Fine mapping of polymorphic alcohol-related quantitative trait loci candidate genes using interval-specific congenic recombinant mice. Ehringer MA, et al. Alcohol Clin Exp Res, 2002 Nov. PMID 12436047
  2. Diversification of stem cell molecular repertoire by alternative splicing. Pritsker M, et al. Proc Natl Acad Sci U S A, 2005 Oct 4. PMID 16183747, Free PMC Article
  3. High-throughput sequence identification of gene coding variants within alcohol-related QTLs. Ehringer MA, et al. Mamm Genome, 2001 Aug. PMID 11471062
  4. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, et al. Science, 2004 Dec 24. PMID 15618518
  5. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • zinc finger protein pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033459.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK137157, DT931029
    Related
    ENSMUST00000277729.1

  2. NR_038065.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL808119
    Related
    ENSMUST00000137929.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    144301200..144309714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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