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Pgk1-rs7 phosphoglycerate kinase-1, related sequence-7 [ Mus musculus (house mouse) ]

Gene ID: 668435, updated on 17-Aug-2024

Summary

Official Symbol
Pgk1-rs7provided by MGI
Official Full Name
phosphoglycerate kinase-1, related sequence-7provided by MGI
Primary source
MGI:MGI:97562
See related
AllianceGenome:MGI:97562
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG668435
Summary
This gene may represent an evolving pseudogene of the phosphoglycerate kinase 1 gene, which has multiple pseudogenes. This gene has an intact open reading frame as well as strong transcriptional support although the gene is intronless. The length of the encoded protein is conserved, compared to the original phosphoglycerate kinase 1 protein. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
12 A1.1; 12 5.53 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (10948566..10950313, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (10898566..10900313, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_31530 Neighboring gene predicted gene, 38407 Neighboring gene STARR-seq mESC enhancer starr_31531 Neighboring gene STARR-seq mESC enhancer starr_31532 Neighboring gene STARR-seq mESC enhancer starr_31533 Neighboring gene predicted gene 4928 Neighboring gene RIKEN cDNA 7420701I03 gene Neighboring gene STARR-seq mESC enhancer starr_31535 Neighboring gene STARR-seq mESC enhancer starr_31536 Neighboring gene potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012888.2 

    Range
    101..1848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    10948566..10950313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)