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Fam236f family with sequence similarity 236, member F [ Mus musculus (house mouse) ]

Gene ID: 668339, updated on 17-Aug-2024

Summary

Official Symbol
Fam236fprovided by MGI
Official Full Name
family with sequence similarity 236, member Fprovided by MGI
Primary source
MGI:MGI:3645559
See related
Ensembl:ENSMUSG00000079479 AllianceGenome:MGI:3645559
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm9112; EG668339
Summary
Orthologous to human FAM236A (family with sequence similarity 235 member A); FAM236B (family with sequence similarity 236 member B); and FAM236D (family with sequence similarity 236 member D). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in placenta adult (RPKM 15.7) and testis adult (RPKM 14.4) See more
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Genomic context

See Fam236f in Genome Data Viewer
Location:
X D; X 45.66 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (101750494..101751276, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (102706888..102707670, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene transcriptional adaptor 3 pseudogene Neighboring gene high mobility group box 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47676 Neighboring gene DMRT-like family C1b Neighboring gene STARR-seq mESC enhancer starr_47677 Neighboring gene ornithine decarboxylase, structural 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC668339

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177365.1NP_001170836.1  uncharacterized protein LOC668339

    Status: VALIDATED

    Source sequence(s)
    CJ042093, CJ042401
    Consensus CDS
    CCDS53157.1
    UniProtKB/TrEMBL
    A2AI92
    Related
    ENSMUSP00000109240.3, ENSMUST00000113610.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    101750494..101751276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)