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Gm14692 predicted gene 14692 [ Mus musculus (house mouse) ]

Gene ID: 666842, updated on 17-Aug-2024

Summary

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Official Symbol
Gm14692provided by MGI
Official Full Name
predicted gene 14692provided by MGI
Primary source
MGI:MGI:3713084
See related
Ensembl:ENSMUSG00000079577 AllianceGenome:MGI:3713084
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm14692 in Genome Data Viewer
Location:
X A7.1; X 34.81 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (66738423..66750635)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (67695698..67706258)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14687 Neighboring gene predicted gene 1140 Neighboring gene ribosomal protein L7A, pseudogene 13 Neighboring gene STARR-seq mESC enhancer starr_47295 Neighboring gene RIKEN cDNA 4933436I01 gene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Reverse genetics reveals single gene of every candidate on Hybrid sterility, X Chromosome QTL 2 (Hstx2) are dispensable for spermatogenesis. Morimoto K, et al. Sci Rep, 2020 Jun 3. PMID 32493902, Free PMC Article
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC666842
Names
synaptonemal complex protein 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163195.1 → NP_001156667.1  uncharacterized protein LOC666842

    See identical proteins and their annotated locations for NP_001156667.1

    Status: VALIDATED

    Source sequence(s)
    BX530092
    Consensus CDS
    CCDS53083.1
    UniProtKB/TrEMBL
    A2BH01
    Related
    ENSMUSP00000110320.2, ENSMUST00000114672.2
    Conserved Domains (1) summary
    pfam04803
    Location:76 → 207
    Cor1; Cor1/Xlr/Xmr conserved region

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    66738423..66750635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036162075.1 → XP_036017968.1  uncharacterized protein LOC666842 isoform X2

    Conserved Domains (1) summary
    pfam04803
    Location:75 → 206
    Cor1; Cor1/Xlr/Xmr conserved region

  2. XM_036162074.1 → XP_036017967.1  uncharacterized protein LOC666842 isoform X1

    UniProtKB/TrEMBL
    A2BH01
    Conserved Domains (1) summary
    pfam04803
    Location:76 → 207
    Cor1; Cor1/Xlr/Xmr conserved region
Nucleotide Protein
Heading Accession and Version

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