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Sike1 suppressor of IKBKE 1 [ Mus musculus (house mouse) ]

Gene ID: 66641, updated on 2-Nov-2024

Summary

Official Symbol
Sike1provided by MGI
Official Full Name
suppressor of IKBKE 1provided by MGI
Primary source
MGI:MGI:1913891
See related
Ensembl:ENSMUSG00000027854 AllianceGenome:MGI:1913891
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Sike; Sikeb; 2810005O12Rik; 5730470L24Rik
Summary
Predicted to enable protein kinase binding activity; protein-macromolecule adaptor activity; and small GTPase binding activity. Predicted to be involved in negative regulation of hippo signaling. Predicted to be located in cytoplasm. Predicted to be part of FAR/SIN/STRIPAK complex. Is expressed in heart ventricle and nervous system. Orthologous to human SIKE1 (suppressor of IKBKE 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in ovary adult (RPKM 19.0), lung adult (RPKM 14.9) and 28 other tissues See more
Orthologs
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Genomic context

See Sike1 in Genome Data Viewer
Location:
3 F2.2; 3 45.25 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (102903056..102911230)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (102995740..103003914)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene synaptonemal complex protein 1 Neighboring gene predicted gene, 33866 Neighboring gene STARR-positive B cell enhancer ABC_E11206 Neighboring gene nuclear receptor subfamily 1, group H, member 5 Neighboring gene predicted gene, 22826 Neighboring gene STARR-positive B cell enhancer ABC_E4568 Neighboring gene STARR-seq mESC enhancer starr_08583 Neighboring gene cold shock domain containing E1, RNA binding Neighboring gene STARR-seq mESC enhancer starr_08584 Neighboring gene neuroblastoma ras oncogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (1)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables protein-macromolecule adaptor activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-macromolecule adaptor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 
enables small GTPase binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in negative regulation of hippo signaling ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of hippo signaling ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of FAR/SIN/STRIPAK complex ISO
Inferred from Sequence Orthology
more info
 
part_of FAR/SIN/STRIPAK complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
suppressor of IKBKE 1
Names
suppressor of IKK epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025679.3NP_079955.1  suppressor of IKBKE 1

    See identical proteins and their annotated locations for NP_079955.1

    Status: PROVISIONAL

    Source sequence(s)
    AK033553
    Consensus CDS
    CCDS17690.1
    UniProtKB/Swiss-Prot
    Q8CBP5, Q9CPR7
    Related
    ENSMUSP00000029447.6, ENSMUST00000029447.12
    Conserved Domains (1) summary
    pfam05769
    Location:2187
    SIKE; SIKE family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    102903056..102911230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)