U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pramel49 PRAME like 49 [ Mus musculus (house mouse) ]

Gene ID: 666187, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
Pramel49provided by MGI
Official Full Name
PRAME like 49provided by MGI
Primary source
MGI:MGI:3779772
See related
Ensembl:ENSMUSG00000094043 AllianceGenome:MGI:3779772
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm7971
Summary
Predicted to enable ubiquitin ligase-substrate adaptor activity. Predicted to act upstream of or within protein ubiquitination. Predicted to be part of Cul2-RING ubiquitin ligase complex. Orthologous to several human genes including PRAMEF1 (PRAME family member 1); PRAMEF10 (PRAME family member 10); and PRAMEF11 (PRAME family member 11). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Pramel49 in Genome Data Viewer
Location:
5 E3; 5 47.29 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (95738694..95742721, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (95590835..95594862, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene PRAME like 48 Neighboring gene PRAME like 57 Neighboring gene predicted gene 6348 Neighboring gene predicted gene 3302 Neighboring gene PRAME like 54 Neighboring gene PRAME like 50

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ubiquitin-like ligase-substrate adaptor activity ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

Go to the top of the page Help
Preferred Names
PRAME family member 8-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    95738694..95742721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_982184.5 → XP_987278.1  PRAME family member 8-like

    See identical proteins and their annotated locations for XP_987278.1

    UniProtKB/TrEMBL
    J3QMM8, L7N204
    Related
    ENSMUSP00000084169.6, ENSMUST00000086950.6
    Conserved Domains (1) summary
    sd00031
    Location:273 → 298
    LRR_1; leucine-rich repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.