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pelE2 pectate lyase PelE2 [ Dickeya fangzhongdai ]

Gene ID: 66565909, updated on 22-Apr-2024

Summary

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Gene symbol
pelE2
Gene description
pectate lyase PelE2
Locus tag
CVE23_RS16450
Gene type
protein coding
Organism
Dickeya fangzhongdai (strain: DSM 101947, nat-host: Pyrus pyrifolia, culture-collection: DSM:101947, type-material: type strain of Dickeya fangzhongdai)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya
Old locus tag
CVE23_16450
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Genomic context

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NZ_CP025003.1Genomic Context describing neighboring genes Neighboring gene NO-inducible flavohemoprotein Neighboring gene pectate lyase PelA Neighboring gene polysaccharide lyase Neighboring gene pectin acetylesterase PaeY

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP025003.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Relationship between the pel genes of the pelADE cluster in Erwinia chrysanthemi strain B374. van Gijsegem F. Mol Microbiol, 1989 Oct. PMID 2615652
  2. Nucleotide sequences of the Erwinia chrysanthemi ogl and pelE genes negatively regulated by the kdgR gene product. Reverchon S, et al. Gene, 1989 Dec 21. PMID 2695393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pectate lyase PelE2
WP_038919872.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP025003.1 Reference assembly

    Range
    3682362..3683564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_038919872.1 MULTISPECIES: pectate lyase PelE2 [Dickeya]

    UniProtKB/TrEMBL
    A0A2K8QPI5
    Conserved Domains (1) summary
    pfam00544
    Location:91 → 320
    Pec_lyase_C; Pectate lyase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases