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FOC43_RS02200 CarD family transcriptional regulator [ Campylobacter coli ]

Gene ID: 66543951, updated on 6-Jun-2024

Summary

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Gene symbol
FOC43_RS02200
Gene description
CarD family transcriptional regulator
Locus tag
FOC43_RS02200
Gene type
protein coding
Organism
Campylobacter coli (strain: FDAARGOS_735, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_735)
Lineage
Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter
Old locus tag
FOC43_02200
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Genomic context

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NZ_CP046317.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Mur ligase family protein Neighboring gene M23 family metallopeptidase Neighboring gene polymer-forming cytoskeletal protein Neighboring gene ATP-binding protein Neighboring gene 3-methyladenine DNA glycosylase Neighboring gene bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase Neighboring gene thiamine phosphate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP046317.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure and function of CarD, an essential mycobacterial transcription factor. Srivastava DB, et al. Proc Natl Acad Sci U S A, 2013 Jul 30. PMID 23858468, Free PMC Article
  2. Structural basis for bacterial transcription-coupled DNA repair. Deaconescu AM, et al. Cell, 2006 Feb 10. PMID 16469698
  3. CdnL, a member of the large CarD-like family of bacterial proteins, is vital for Myxococcus xanthus and differs functionally from the global transcriptional regulator CarD. García-Moreno D, et al. Nucleic Acids Res, 2010 Aug. PMID 20371514, Free PMC Article
  4. Recruitment of a novel zinc-bound transcriptional factor by a bacterial HMGA-type protein is required for regulating multiple processes in Myxococcus xanthus. Peñalver-Mellado M, et al. Mol Microbiol, 2006 Aug. PMID 16879646
  5. Domain architecture of a high mobility group A-type bacterial transcriptional factor. Padmanabhan S, et al. J Biol Chem, 2001 Nov 9. PMID 11533063

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
CarD family transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP046317.1 Reference assembly

    Range
    442159..445095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002799252.1 CarD family transcriptional regulator [Campylobacter coli]

    See identical proteins and their annotated locations for WP_002799252.1

    UniProtKB/TrEMBL
    A0A5T2CLC7, A0A5Z0XCR3
    Conserved Domains (1) summary
    COG1197
    Location:5 → 966
    Mfd; Transcription-repair coupling factor (superfamily II helicase) [Replication, recombination and repair, Transcription]
Nucleotide Protein
Heading Accession and Version