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Nova1 NOVA alternative splicing regulator 1 [ Mus musculus (house mouse) ]

Gene ID: 664883, updated on 11-Nov-2024

Summary

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Official Symbol
Nova1provided by MGI
Official Full Name
NOVA alternative splicing regulator 1provided by MGI
Primary source
MGI:MGI:104297
See related
Ensembl:ENSMUSG00000021047 AllianceGenome:MGI:104297
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Nova-1; G630039L02; 9430099M15Rik
Summary
Enables mRNA 3'-UTR binding activity and sequence-specific mRNA binding activity. Involved in negative regulation of cold-induced thermogenesis and regulation of alternative mRNA splicing, via spliceosome. Acts upstream of or within mRNA splicing, via spliceosome and regulation of RNA metabolic process. Located in nucleus. Is expressed in several structures, including nervous system and retina. Orthologous to human NOVA1 (NOVA alternative splicing regulator 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in whole brain E14.5 (RPKM 9.0), CNS E14 (RPKM 7.1) and 8 other tissues See more
Orthologs
human all
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Genomic context

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See Nova1 in Genome Data Viewer
Location:
12 B3; 12 21.46 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (46744678..46866143, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (46697895..46819480, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene PRAME family member 8 pseudogene Neighboring gene STARR-seq mESC enhancer starr_32056 Neighboring gene STARR-seq mESC enhancer starr_32057 Neighboring gene high mobility group box 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_32058 Neighboring gene STARR-seq mESC enhancer starr_32059 Neighboring gene predicted gene, 33869 Neighboring gene STARR-seq mESC enhancer starr_32061 Neighboring gene STARR-seq mESC enhancer starr_32062 Neighboring gene predicted gene 2089 Neighboring gene STARR-seq mESC enhancer starr_32063 Neighboring gene STARR-seq mESC enhancer starr_32064 Neighboring gene STARR-seq mESC enhancer starr_32065 Neighboring gene predicted gene 7392

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. NOVA1 acts on Impact to regulate hypothalamic function and translation in inhibitory neurons.
    Title: NOVA1 acts on Impact to regulate hypothalamic function and translation in inhibitory neurons.
  2. Nova1 or Bim Deficiency in Pancreatic beta-Cells Does Not Alter Multiple Low-Dose Streptozotocin-Induced Diabetes and Diet-Induced Obesity in Mice.
    Title: Nova1 or Bim Deficiency in Pancreatic β-Cells Does Not Alter Multiple Low-Dose Streptozotocin-Induced Diabetes and Diet-Induced Obesity in Mice.
  3. Aberrant NOVA1 function disrupts alternative splicing in early stages of amyotrophic lateral sclerosis.
    Title: Aberrant NOVA1 function disrupts alternative splicing in early stages of amyotrophic lateral sclerosis.
  4. MicroRNA miR-27a-3p accelerates cardiac hypertrophy by targeting neuro-oncological ventral antigen 1.
    Title: MicroRNA miR-27a-3p accelerates cardiac hypertrophy by targeting neuro-oncological ventral antigen 1.
  5. a major role for NOVA in regulating cytoskeleton interactions in motoneurons, is reported.
    Title: Cell type-specific CLIP reveals that NOVA regulates cytoskeleton interactions in motoneurons.
  6. Together, these results demonstrate that the production of DCC splice variants controlled by NOVA has a crucial function during many stages of commissural neuron development.
    Title: NOVA regulates Dcc alternative splicing during neuronal migration and axon guidance in the spinal cord.
  7. Phenotypic analysis of the NOVA-deficient mice demonstrated increased adipose tissue thermogenesis and improved glycemia.
    Title: An alternative splicing program promotes adipose tissue thermogenesis.
  8. RBM4a ablation enhanced the relative level of exon 4-excluded neuro-oncological ventral antigen 1 (Nova1(-4)) transcripts, which were predominantly generated in embryonic BAs
    Title: RBM4-Nova1-SRSF6 splicing cascade modulates the development of brown adipocytes.
  9. identify Nova-1 and hnRNP M as D2R pre-mRNA-binding proteins and show their antagonistic role in the alternative splicing of D2R pre-mRNA.
    Title: Regulatory roles of heterogeneous nuclear ribonucleoprotein M and Nova-1 protein in alternative splicing of dopamine D2 receptor pre-mRNA.
  10. integrative network revealed combinatorial regulation by Nova and the neuronal splicing factor Fox, interplay between phosphorylation and splicing, and potential links to neurologic disease
    Title: Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls.
Submit: New GeneRIF Correction See all GeneRIFs (16)

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (6) 
  • Targeted (4)  1 citation

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables RNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables mRNA 3'-UTR binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables sequence-specific mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables sequence-specific mRNA binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within mRNA splicing, via spliceosome IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within mRNA splicing, via spliceosome IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of cold-induced thermogenesis IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of RNA metabolic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in regulation of alternative mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of alternative mRNA splicing, via spliceosome IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of alternative mRNA splicing, via spliceosome IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of mRNA processing ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
  
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
  
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IC
Inferred by Curator
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein Nova-1
Names
neuro-oncological ventral antigen 1
ventral neuron-specific protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001364634.1 → NP_001351563.1  RNA-binding protein Nova-1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC108802, AC156636, CT009504
    Conserved Domains (1) summary
    cl00098
    Location:49 → 121
    KH-I; K homology (KH) RNA-binding domain, type I

  2. NM_001364635.1 → NP_001351564.1  RNA-binding protein Nova-1 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC108802, AC156636, CT009504
    Conserved Domains (2) summary
    cd00105
    Location:398 → 463
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd02396
    Location:148 → 213
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...

  3. NM_001364636.1 → NP_001351565.1  RNA-binding protein Nova-1 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC108802, AC156636, CT009504
    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:300 → 370
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:50 → 119
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  4. NM_001364637.1 → NP_001351566.1  RNA-binding protein Nova-1 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC108802, AC156636, CT009504
    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:300 → 370
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:50 → 119
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  5. NM_001364638.1 → NP_001351567.1  RNA-binding protein Nova-1 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC108802, AC156636, CT009504
    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:276 → 346
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:26 → 95
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  6. NM_001364639.1 → NP_001351568.1  RNA-binding protein Nova-1 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC108802, AC156636
    Conserved Domains (1) summary
    cd02396
    Location:51 → 117
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...

  7. NM_021361.2 → NP_067336.1  RNA-binding protein Nova-1 isoform 1

    See identical proteins and their annotated locations for NP_067336.1

    Status: VALIDATED

    Source sequence(s)
    AC108802, AW491473, BM942596, CT009504
    Consensus CDS
    CCDS49058.1
    UniProtKB/Swiss-Prot
    Q8C8B9, Q9JKN6
    Related
    ENSMUSP00000021438.7, ENSMUST00000021438.8
    Conserved Domains (1) summary
    cl00098
    Location:49 → 121
    KH-I; K homology (KH) RNA-binding domain, type I

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    46744678..46866143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017315157.2 → XP_017170646.1  RNA-binding protein Nova-1 isoform X9

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:300 → 370
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:50 → 119
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  2. XM_036157578.1 → XP_036013471.1  RNA-binding protein Nova-1 isoform X12

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:250 → 320
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:2 → 69
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  3. XM_036157571.1 → XP_036013464.1  RNA-binding protein Nova-1 isoform X8

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:323 → 393
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:75 → 142
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  4. XM_030246862.2 → XP_030102722.1  RNA-binding protein Nova-1 isoform X9

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:300 → 370
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:50 → 119
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  5. XM_036157568.1 → XP_036013461.1  RNA-binding protein Nova-1 isoform X8

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:323 → 393
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:75 → 142
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  6. XM_036157579.1 → XP_036013472.1  RNA-binding protein Nova-1 isoform X12

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:250 → 320
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:2 → 69
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  7. XM_036157577.1 → XP_036013470.1  RNA-binding protein Nova-1 isoform X12

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:250 → 320
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:2 → 69
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  8. XM_030246863.1 → XP_030102723.1  RNA-binding protein Nova-1 isoform X9

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:300 → 370
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:50 → 119
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  9. XM_036157569.1 → XP_036013462.1  RNA-binding protein Nova-1 isoform X8

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:323 → 393
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:75 → 142
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  10. XM_030246865.1 → XP_030102725.1  RNA-binding protein Nova-1 isoform X9

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:300 → 370
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:50 → 119
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  11. XM_036157572.1 → XP_036013465.1  RNA-binding protein Nova-1 isoform X8

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:323 → 393
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:75 → 142
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  12. XM_036157566.1 → XP_036013459.1  RNA-binding protein Nova-1 isoform X5

    Conserved Domains (3) summary
    cd09031
    Location:381 → 451
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22435
    Location:8 → 80
    KH-I_NOVA_rpt1; first type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:131 → 200
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  13. XM_036157563.1 → XP_036013456.1  RNA-binding protein Nova-1 isoform X3

    Conserved Domains (3) summary
    cd09031
    Location:404 → 474
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22435
    Location:8 → 80
    KH-I_NOVA_rpt1; first type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:156 → 223
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  14. XM_036157564.1 → XP_036013457.1  RNA-binding protein Nova-1 isoform X3

    Conserved Domains (3) summary
    cd09031
    Location:404 → 474
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22435
    Location:8 → 80
    KH-I_NOVA_rpt1; first type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:156 → 223
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  15. XM_036157573.1 → XP_036013466.1  RNA-binding protein Nova-1 isoform X8

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:323 → 393
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:75 → 142
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  16. XM_036157565.1 → XP_036013458.1  RNA-binding protein Nova-1 isoform X3

    Conserved Domains (3) summary
    cd09031
    Location:404 → 474
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22435
    Location:8 → 80
    KH-I_NOVA_rpt1; first type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:156 → 223
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  17. XM_030246859.2 → XP_030102719.1  RNA-binding protein Nova-1 isoform X7

    Conserved Domains (2) summary
    cd00105
    Location:358 → 423
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd02396
    Location:108 → 173
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...

  18. XM_030246868.1 → XP_030102728.1  RNA-binding protein Nova-1 isoform X11

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:276 → 346
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:26 → 95
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  19. XM_030246864.1 → XP_030102724.1  RNA-binding protein Nova-1 isoform X9

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:300 → 370
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:50 → 119
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  20. XM_036157570.1 → XP_036013463.1  RNA-binding protein Nova-1 isoform X8

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:323 → 393
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:75 → 142
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  21. XM_036157574.1 → XP_036013467.1  RNA-binding protein Nova-1 isoform X8

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:323 → 393
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:75 → 142
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  22. XM_030246866.2 → XP_030102726.1  RNA-binding protein Nova-1 isoform X9

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:300 → 370
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:50 → 119
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  23. XM_036157575.1 → XP_036013468.1  RNA-binding protein Nova-1 isoform X10

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:280 → 350
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:32 → 99
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  24. XM_030246857.2 → XP_030102717.1  RNA-binding protein Nova-1 isoform X6

    Conserved Domains (3) summary
    cd09031
    Location:361 → 431
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22435
    Location:12 → 84
    KH-I_NOVA_rpt1; first type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:111 → 180
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  25. XM_006516151.4 → XP_006516214.1  RNA-binding protein Nova-1 isoform X4

    See identical proteins and their annotated locations for XP_006516214.1

    Conserved Domains (1) summary
    cl00098
    Location:12 → 84
    KH-I; K homology (KH) RNA-binding domain, type I

  26. XM_036157562.1 → XP_036013455.1  RNA-binding protein Nova-1 isoform X2

    Conserved Domains (3) summary
    cd09031
    Location:408 → 478
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22435
    Location:12 → 84
    KH-I_NOVA_rpt1; first type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:160 → 227
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  27. XM_036157576.1 → XP_036013469.1  RNA-binding protein Nova-1 isoform X12

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:250 → 320
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:2 → 69
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  28. XM_036157561.1 → XP_036013454.1  RNA-binding protein Nova-1 isoform X1

    Conserved Domains (3) summary
    cd09031
    Location:445 → 515
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22435
    Location:49 → 121
    KH-I_NOVA_rpt1; first type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:197 → 264
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

  29. XM_036157567.1 → XP_036013460.1  RNA-binding protein Nova-1 isoform X8

    UniProtKB/TrEMBL
    A3KMK7
    Conserved Domains (2) summary
    cd09031
    Location:323 → 393
    KH-I_NOVA_rpt3; third type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)
    cd22436
    Location:75 → 142
    KH-I_NOVA_rpt2; second type I K homology (KH) RNA-binding domain found in the family of neuro-oncological ventral antigen (Nova)

RNA

  1. XR_004937536.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9JKN6.2 GenPept UniProtKB/Swiss-Prot:Q9JKN6

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