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Sce E3 ubiquitin-protein ligase Sce [ Drosophila willistoni ]

Gene ID: 6647165, updated on 22-May-2024

Summary

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Gene symbol
Sce
Gene description
E3 ubiquitin-protein ligase Sce
Locus tag
Dwil_GK11322
See related
EnsemblRapid:LOC6647165
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila willistoni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GK11322; GK11322-PA
Orthologs
fruit fly all
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Genomic context

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See Sce in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
2
Annotation release Status Assembly Chr Location
102 current UCI_dwil_1.1 (GCF_018902025.1) 3R NC_061086.1 (25440717..25442460)
101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032853.1 (3748924..3750668, complement)

Chromosome 3R - NC_061086.1Genomic Context describing neighboring genes Neighboring gene programmed cell death 6-interacting protein-like protein AliX Neighboring gene HSPB1 associated protein 1 Neighboring gene uncharacterized LOC6647019 Neighboring gene uncharacterized LOC6647018 Neighboring gene uncharacterized LOC6647164 Neighboring gene Hydroxysteroid dehydrogenase like 2 Neighboring gene Vacuolar protein sorting-associated protein YL-1 Neighboring gene unc80, NALCN channel complex subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PcG protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RING1
Names
Dwil\GK11322
Dwil\GK11322-PA
dwil_GLEANR_11542

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_dwil_1.1

Genomic

  1. NC_061086.1 Reference UCI_dwil_1.1

    Range
    25440717..25442460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002069859.4 → XP_002069895.1  E3 ubiquitin-protein ligase RING1

    See identical proteins and their annotated locations for XP_002069895.1

    UniProtKB/TrEMBL
    B4NAR7
    Related
    XP_002069895.1, XM_002069859.4
    Conserved Domains (2) summary
    cd00162
    Location:45 → 89
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam16207
    Location:322 → 417
    RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like
Nucleotide Protein
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