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LOC6640864 probable transaldolase [ Drosophila willistoni ]

Gene ID: 6640864, updated on 10-May-2024

Summary

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Gene symbol
LOC6640864
Gene description
probable transaldolase
Locus tag
Dwil_GK15717
See related
EnsemblRapid:LOC6640864
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila willistoni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GK15717; GK15717-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6640864 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
3
Annotation release Status Assembly Chr Location
102 current UCI_dwil_1.1 (GCF_018902025.1) 2L Unlocalized Scaffold NW_025814047.1 (4024439..4026922, complement)
101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032471.1 (1152895..1155322, complement)

NW_025814047.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6641001 Neighboring gene G protein alpha s subunit Neighboring gene U3 small nucleolar RNA-associated protein 25 homolog Neighboring gene ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting SERCA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transaldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable transaldolase
Names
Dwil\GK15717
Dwil\GK15717-PA
dwil_GLEANR_15964

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_dwil_1.1

Genomic

  1. NW_025814047.1 Reference UCI_dwil_1.1

    Range
    4024439..4026922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002063749.4 → XP_002063785.2  probable transaldolase

    UniProtKB/TrEMBL
    B4MRN2
    Related
    XP_002063785.2, XM_002063749.4
    Conserved Domains (2) summary
    PRK05269
    Location:10 → 329
    PRK05269; transaldolase B; Provisional
    PTZ00411
    Location:10 → 326
    PTZ00411; transaldolase-like protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials