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Psc Posterior sex combs [ Drosophila willistoni ]

Gene ID: 6638152, updated on 24-May-2024

Summary

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Gene symbol
Psc
Gene description
Posterior sex combs
Locus tag
Dwil_GK20868
See related
EnsemblRapid:LOC6638152
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila willistoni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GK20868; GK20868-PB
Orthologs
fruit fly all
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Genomic context

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See Psc in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
5
Annotation release Status Assembly Chr Location
102 current UCI_dwil_1.1 (GCF_018902025.1) 2L Unlocalized Scaffold NW_025814046.1 (3200585..3218509, complement)
101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032467.1 (983280..1001167)

NW_025814046.1Genomic Context describing neighboring genes Neighboring gene natterin-3 Neighboring gene uncharacterized LOC6638249 Neighboring gene Suppressor of zeste 2 Neighboring gene uncharacterized LOC6638150

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables promoter-specific chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb group protein Psc
Names
Dwil\GK20868
Dwil\GK20868-PB
dwil_GLEANR_3636

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_dwil_1.1

Genomic

  1. NW_025814046.1 Reference UCI_dwil_1.1

    Range
    3200585..3218509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023176865.2 → XP_023032633.1  polycomb group protein Psc

    UniProtKB/TrEMBL
    B4MJP4
    Related
    XP_023032633.1, XM_023176865.2
    Conserved Domains (3) summary
    pfam16207
    Location:377 → 444
    RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like
    cd16525
    Location:240 → 281
    RING-HC_PCGF; RING finger, HC subclass, found in Polycomb Group RING finger homologs (PCGF1, 2, 3, 4, 5 and 6), and similar proteins
    cl26464
    Location:1018 → 1403
    Atrophin-1; Atrophin-1 family

  2. XM_023176857.2 → XP_023032625.1  polycomb group protein Psc

    UniProtKB/TrEMBL
    B4MJP4
    Related
    XP_023032625.1, XM_023176857.2
    Conserved Domains (3) summary
    pfam16207
    Location:377 → 444
    RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like
    cd16525
    Location:240 → 281
    RING-HC_PCGF; RING finger, HC subclass, found in Polycomb Group RING finger homologs (PCGF1, 2, 3, 4, 5 and 6), and similar proteins
    cl26464
    Location:1018 → 1403
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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