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Hs3st-B Heparan sulfate 3-O sulfotransferase-B [ Drosophila virilis ]

Gene ID: 6635609, updated on 22-May-2024

Summary

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Gene symbol
Hs3st-B
Gene description
Heparan sulfate 3-O sulfotransferase-B
Locus tag
Dvir_GJ15310
See related
EnsemblRapid:LOC6635609
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ15310; GJ15310-PA
Orthologs
fruit fly all
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Genomic context

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See Hs3st-B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587575.1 (11953863..11956422)

NW_022587575.1Genomic Context describing neighboring genes Neighboring gene cAMP-specific 3',5'-cyclic phosphodiesterase Neighboring gene histone H3.3A Neighboring gene protein-lysine N-methyltransferase EEF2KMT Neighboring gene uncharacterized LOC6635608 Neighboring gene scoloptoxin SSD14 Neighboring gene Succinate dehydrogenase, subunit B (iron-sulfur)-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587575 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6
Names
Dvir\GJ15310
Dvir\GJ15310-PA
dvir_GLEANR_15628

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587575.1 Reference DvirRS2

    Range
    11953863..11956422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002058916.3 → XP_002058952.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    See identical proteins and their annotated locations for XP_002058952.1

    UniProtKB/TrEMBL
    B4MCU9
    Related
    XP_002058952.1, XM_002058916.3
    Conserved Domains (1) summary
    pfam00685
    Location:120 → 357
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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