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botv exostosin like glycosyltransferase 3 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 663383, updated on 24-May-2024

Summary

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Gene symbol
botv
Gene description
exostosin like glycosyltransferase 3
Locus tag
TcasGA2_TC013377
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See botv in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (5275345..5278813)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (10311943..10315413, complement)

Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene dipeptidase 1 Neighboring gene uncharacterized LOC135266289 Neighboring gene homocysteine S-methyltransferase Neighboring gene hypothetical protein Neighboring gene Mediator complex subunit 11 Neighboring gene Glucose transporter 4 enhancer factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-3
Names
GLEAN_13377
brother of tout-velu

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

    Range
    5275345..5278813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_969434.5 → XP_974527.1  exostosin-3

    See identical proteins and their annotated locations for XP_974527.1

    UniProtKB/TrEMBL
    D6WLW9
    Conserved Domains (3) summary
    pfam03016
    Location:191 → 521
    Exostosin; Exostosin family
    pfam07200
    Location:89 → 154
    Mod_r; Modifier of rudimentary (Mod(r)) protein
    pfam09258
    Location:682 → 916
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein Strain
Heading Accession and Version

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