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I6J55_RS12075 family 78 glycoside hydrolase catalytic domain [ Bacteroides fragilis ]

Gene ID: 66330571, discontinued on 23-Aug-2024
  • This record was discontinued.

Summary

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Gene symbol
I6J55_RS12075
Gene description
family 78 glycoside hydrolase catalytic domain
Locus tag
I6J55_RS12075
Gene type
protein coding
Organism
Bacteroides fragilis (strain: FDAARGOS_1225, culture-collection: FDA:FDAARGOS_1225)
Lineage
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Old locus tag
I6J55_12075
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Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP069563.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
family 78 glycoside hydrolase catalytic domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP069563.1 Reference assembly

    Range
    2900798..2903437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_008769247.1 family 78 glycoside hydrolase catalytic domain [Bacteroides fragilis]

    See identical proteins and their annotated locations for WP_008769247.1

    Conserved Domains (4) summary
    pfam05592
    Location:347 → 458
    Bac_rhamnosid; Bacterial alpha-L-rhamnosidase concanavalin-like domain
    pfam17390
    Location:799 → 875
    Bac_rhamnosid_C; Bacterial alpha-L-rhamnosidase C-terminal domain
    pfam08531
    Location:167 → 335
    Bac_rhamnosid_N; Alpha-L-rhamnosidase N-terminal domain
    pfam17389
    Location:462 → 793
    Bac_rhamnosid6H; Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
Nucleotide Protein
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