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LOC6627305 beta-1,3-galactosyltransferase 6 [ Drosophila virilis ]

Gene ID: 6627305, updated on 10-May-2024

Summary

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Gene symbol
LOC6627305
Gene description
beta-1,3-galactosyltransferase 6
Locus tag
Dvir_GJ15057
See related
EnsemblRapid:LOC6627305
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ15057; GJ15057-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6627305 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587571.1 (6291948..6293301)

NW_022587571.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC26531233 Neighboring gene ribosomal protein L5 Neighboring gene vacuolar protein sorting-associated protein light Neighboring gene serine/threonine-protein kinase GA29083 Neighboring gene uncharacterized LOC116651374 Neighboring gene Sarcolemma associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587571 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 6
Names
Dvir\GJ15057
Dvir\GJ15057-PA
dvir_GLEANR_1536

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587571.1 Reference DvirRS2

    Range
    6291948..6293301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002051250.3 → XP_002051286.1  beta-1,3-galactosyltransferase 6

    See identical proteins and their annotated locations for XP_002051286.1

    UniProtKB/TrEMBL
    B4LQQ7
    Related
    XP_002051286.1, XM_002051250.3
    Conserved Domains (1) summary
    cl21608
    Location:133 → 311
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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