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LOC6626954 GDP-fucose protein O-fucosyltransferase 1 [ Drosophila virilis ]

Gene ID: 6626954, updated on 10-May-2024

Summary

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Gene symbol
LOC6626954
Gene description
GDP-fucose protein O-fucosyltransferase 1
Locus tag
Dvir_GJ20763
See related
EnsemblRapid:LOC6626954
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ20763; GJ20763-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6626954 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587569.1 (1379956..1381465)

NW_022587569.1Genomic Context describing neighboring genes Neighboring gene Additional sex combs Neighboring gene phosphopantothenoylcysteine decarboxylase Neighboring gene eukaryotic translation initiation factor 3 subunit M Neighboring gene DNA excision repair protein Ercc1 Neighboring gene cytosolic iron-sulfur assembly component 1 Neighboring gene Hermansky-Pudlak syndrome 1 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587569 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1
Names
Dvir\GJ20763
Dvir\GJ20763-PA
dvir_GLEANR_6177

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587569.1 Reference DvirRS2

    Range
    1379956..1381465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002049370.3 → XP_002049406.2  GDP-fucose protein O-fucosyltransferase 1

    UniProtKB/TrEMBL
    B4LJU0
    Related
    XP_002049406.2, XM_002049370.3
    Conserved Domains (2) summary
    cd11302
    Location:25 → 385
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
    pfam10250
    Location:35 → 378
    O-FucT; GDP-fucose protein O-fucosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials