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Pgant1 Polypeptide N-Acetylgalactosaminyltransferase 1 [ Drosophila virilis ]

Gene ID: 6625584, updated on 24-May-2024

Summary

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Gene symbol
Pgant1
Gene description
Polypeptide N-Acetylgalactosaminyltransferase 1
Locus tag
Dvir_GJ22477
See related
EnsemblRapid:LOC6625584
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ22477; GJ22477-PA; GJ22477-PB
Orthologs
fruit fly all
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Genomic context

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See Pgant1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587567.1 (5626686..5630923, complement)

NW_022587567.1Genomic Context describing neighboring genes Neighboring gene SPARC related modular calcium binding-like protein magu Neighboring gene nose resistant to fluoxetine protein 6 Neighboring gene Kinesin heavy chain 73 Neighboring gene putative mediator of RNA polymerase II transcription subunit 12 Neighboring gene Ionotropic receptor 52a Neighboring gene uncharacterized LOC6625485

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587567 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1
Names
Dvir\GJ22477
Dvir\GJ22477-PA
Dvir\GJ22477-PB
dvir_GLEANR_7761

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587567.1 Reference DvirRS2

    Range
    5626686..5630923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015174703.2 → XP_015030189.1  polypeptide N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    B4LP33
    Related
    XP_015030189.1, XM_015174703.2
    Conserved Domains (2) summary
    cd02510
    Location:148 → 457
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:469 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_002050998.3 → XP_002051034.1  polypeptide N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    B4LP33
    Related
    XP_002051034.1, XM_002050998.3
    Conserved Domains (2) summary
    cd02510
    Location:148 → 457
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:469 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_032436020.1 → XP_032291911.1  polypeptide N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    B4LP33
    Related
    XP_032291911.1, XM_032436020.1
    Conserved Domains (2) summary
    cd02510
    Location:148 → 457
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:469 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein Strain
Heading Accession and Version

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