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ttv exostosin glycosyltransferase 1 ttv [ Drosophila virilis ]

Gene ID: 6624746, updated on 23-May-2024

Summary

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Gene symbol
ttv
Gene description
exostosin glycosyltransferase 1 ttv
Locus tag
Dvir_GJ20607
See related
EnsemblRapid:LOC6624746
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ20607; GJ20607-PA; GJ20607-PB; GJ20607-PC; GJ20607-PD
Orthologs
fruit fly all
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Genomic context

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See ttv in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587568.1 (1777064..1847354)

NW_022587568.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6625898 Neighboring gene uncharacterized LOC116651118 Neighboring gene Cuticular protein 51A Neighboring gene uncharacterized LOC116651120 Neighboring gene uncharacterized LOC6624748 Neighboring gene uncharacterized LOC116651119 Neighboring gene lamin-C Neighboring gene uncharacterized LOC26531647 Neighboring gene cathepsin L

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587568 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-1
Names
Dvir\GJ20607
Dvir\GJ20607-PA
Dvir\GJ20607-PB
Dvir\GJ20607-PC
Dvir\GJ20607-PD
dvir_GLEANR_6033

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587568.1 Reference DvirRS2

    Range
    1777064..1847354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015173914.2 → XP_015029400.1  exostosin-1 isoform X2

    UniProtKB/TrEMBL
    A0A0Q9W3L9
    Related
    XP_015029400.1, XM_015173914.2
    Conserved Domains (1) summary
    pfam03016
    Location:100 → 319
    Exostosin; Exostosin family

  2. XM_002049670.3 → XP_002049706.1  exostosin-1 isoform X1

    See identical proteins and their annotated locations for XP_002049706.1

    UniProtKB/TrEMBL
    B4LLN6
    Related
    XP_002049706.1, XM_002049670.3
    Conserved Domains (2) summary
    pfam03016
    Location:100 → 389
    Exostosin; Exostosin family
    pfam09258
    Location:473 → 730
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein Strain
Heading Accession and Version

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