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Chsy Chondroitin sulfate synthase [ Drosophila sechellia ]

Gene ID: 6619939, updated on 23-May-2024

Summary

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Gene symbol
Chsy
Gene description
Chondroitin sulfate synthase
Locus tag
Dsec_GM22544
See related
EnsemblRapid:LOC6619939
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM22544; GM22544-PA
Orthologs
fruit fly all
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Genomic context

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See Chsy in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) X NC_045954.1 (15582248..15590466, complement)

Chromosome X - NC_045954.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog subfamily C member 25 homolog Neighboring gene protein krueppel Neighboring gene DALR anticodon-binding domain-containing protein 3 Neighboring gene Alkaline phosphatase 11 Neighboring gene dorsal-ventral patterning protein Sog Neighboring gene uncharacterized LOC116802005

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045954.1 Chromosome X Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 1
Names
Dsec\GM22544
Dsec\GM22544-PA
dsec_GLEANR_5362

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045954.1 Reference ASM438219v1

    Range
    15582248..15590466 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002044115.2 → XP_002044151.2  chondroitin sulfate synthase 1

    Related
    XP_002044151.2, XM_002044115.2
    Conserved Domains (2) summary
    pfam05679
    Location:221 → 801
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:71 → 251
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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